BAC Information

Click to search

BAC

Clone NameB6Ng01-316L14
ChromosomeX (Build37)
Map Location 14,256,619 - 14,257,431
singlet/doubletsinglet
Overlap genenone
Upstream geneCask, LOC385327, EG385328
Downstream geneLOC668991, 4930403L05Rik
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316L14.bB6Ng01-316L14.g
ACCGA107048GA107049
length9231,198
definitionB6Ng01-316L14.b B6Ng01-316L14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctgtaagtctgttattatttgctaggtattctttcttttact
gtctgttagctcatttatcatatttttgctttcatatactcatgaattaa
tttgtatccattttgtaacataaacagaatcatataaccatttaagatat
ttattactaagtacaaagtgggattaataaccctaaggatgtttgaaaaa
aaccatagggaatcaaatattttttttataagtgacaaacatgttaagtg
tatgtgtttatatagtttaaataaagttatactaattggaggaatgaatg
gtacctcaagggccatagctcaaaacataaaacaaagacaaaaattaaag
aaaataaaaacaaacaaccaaataacgaaaccaaaaaaaaaaaaaaaaaa
aagaaagaacgaaagaaagaaagaaagaaagaaagaaagaaaaaagaaaa
tcccaatgccagatatcagatatggtaaacctcctttgagttgtatgtag
gtcagaagaggctgagagaccccctaaaacaatacagaatattgctatta
tctttggttgtctccaagaaatcgaagataagaccttattgctaaagaca
ccacactcattaaacaaagaacttttcagaattgaagtggaatgagcctg
tgttgtggatggccctggtgctgttatatttggatgttaattccactttc
ccaggagggtttttctggaaagaggaatgagtaaggtactcaggttatac
ttgtgaatcatcccctaatgaataaaggaatccatcactggggcaagtag
gcgggacttccagggatgggacggaggaagagaggaggcagggttttttt
ttgtttgtttgtttgtttgttttgttttttaatgggagatagtggacaga
acgagatgtagctactagtgtcc

gaattctcacctgaggaataccgaatggcagagaagtacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcatggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacctccactatggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatcgacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagagggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagacactagcatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggccctagcaaa
catagaaagtggatgctcaacagtcggctattggatggatcacatgggcc
cccaattgaaggagctaggagaaagtacccaagaaggcttaaaggggatc
ttgcacctttaggtcgaaacaacattatgaactaaccagttaccccggga
gcttctttgactctagcctgcattatgcatcaaaagatgccttagtcggc
catcacttgaagagagtccaattggtaccgctacctttatattgccaagt
actggaaacgctcacggtcctattaaatggggtaaaatgtgtgatggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_14256619_14257431
seq2: B6Ng01-316L14.b_47_860

seq1  GAATTCTTCTGTAAGTCTGTTATTATTTGCTAGGTATTCTTTCTTTTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGTAAGTCTGTTATTATTTGCTAGGTATTCTTTCTTTTACT  50

seq1  GTCTGTTAGCTCATTTATCATATTTTTGCTTTCATATACTCATGAATTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTTAGCTCATTTATCATATTTTTGCTTTCATATACTCATGAATTAA  100

seq1  TTTGTATCCATTTTGTAACATAAACAGAATCATATAACCATTTAAGATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATCCATTTTGTAACATAAACAGAATCATATAACCATTTAAGATAT  150

seq1  TTATTACTAAGTACAAAGTGGGATTAATAACCCTAAGGATGTTTGAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACTAAGTACAAAGTGGGATTAATAACCCTAAGGATGTTTGAAAAA  200

seq1  AACCATAGGGAATCAAATATTTTTTTTATAAGTGACAAACATGTTAAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATAGGGAATCAAATATTTTTTTTATAAGTGACAAACATGTTAAGTG  250

seq1  TATGTGTTTATATAGTTTAAATAAAGTTATACTAATTGGAGGAATGAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTTTATATAGTTTAAATAAAGTTATACTAATTGGAGGAATGAATG  300

seq1  GTACCTCAAGGGCCATAGCTCAAAACATAAAACAAAGACAAAAATTAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTCAAGGGCCATAGCTCAAAACATAAAACAAAGACAAAAATTAAAG  350

seq1  AAAATAAAAACAAACAACCAAATAACGAAACCAAAAAAAAAAAAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAAACAAACAACCAAATAACGAAACCAAAAAAAAAAAAAAAAAA  400

seq1  AAGAAAGAACGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAAGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAACGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAAGAAAA  450

seq1  TCCCAATGCCAGATATCAGATATGGTAAACCTCCTTTGAGTTGTATGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATGCCAGATATCAGATATGGTAAACCTCCTTTGAGTTGTATGTAG  500

seq1  GTCAGAAGAGGCTGAGAGACCCCCTAAAACAATACAGAATATTGCTATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAAGAGGCTGAGAGACCCCCTAAAACAATACAGAATATTGCTATTA  550

seq1  TCTTTGGTTGTCTCCAAGAAATCGAAGATAAGACCTTATTGCTAAAGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGTTGTCTCCAAGAAATCGAAGATAAGACCTTATTGCTAAAGACA  600

seq1  CCACACTCATTAAACAAAGAACTTTTCAGAATTGAAGTGGAATGAGCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTCATTAAACAAAGAACTTTTCAGAATTGAAGTGGAATGAGCCTG  650

seq1  TGTTGTGGATGGCCCTGGTGCTGTTATATTTGGATGTTAATTCCACTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGGATGGCCCTGGTGCTGTTATATTTGGATGTTAATTCCACTTTC  700

seq1  CCAGGAGGGTTTTTCTGGAAAGAGGAATGAGTAAGGTACTCAGGTTATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAGGGTTTTTCTGGAAAGAGGAATGAGTAAGGTACTCAGGTTATAC  750

seq1  TTGTGAATCATCCCCTAATGAATAAAGGAATCCATCACT-GGGCAAGTAG  799
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTGTGAATCATCCCCTAATGAATAAAGGAATCCATCACTGGGGCAAGTAG  800

seq1  GCGGGACTTCCAGG  813
      ||||||||||||||
seq2  GCGGGACTTCCAGG  814


| Home | SequenceCutter | Blast | Download |