BAC Information

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BAC

Clone NameB6Ng01-317J20
ChromosomeX (Build37)
Map Location 73,880,471 - 73,881,305
singlet/doubletsinglet
Overlap genenone
Upstream geneEG635243, Pls3, LOC635275, EG635295, LOC667537, LOC385472, LOC100041147, EG238829, Magea7, 4930428D18Rik, EG544974, 4930468A15Rik
Downstream geneLOC385474, EG436208, LOC546331, LOC100041212, Tbl1x
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317J20.bB6Ng01-317J20.g
ACCGA107714GA107715
length8401,190
definitionB6Ng01-317J20.b B6Ng01-317J20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggatgaatgatgtgattctaagtttttcaagatactccctttt
ttgctcttttaaaaacacagtgagttaaaatactgaacaacaagttaaaa
atggaacagtgtctaaagaccaaagcatattacccatttatcctattata
tcaaaatttatagtgagaattttctttattgactttattttagttttttt
gtacacaaagaaaagtcatgttcatatccatcatgatcaaaaacttcaaa
aggcagaactagaagacacaagtccttcaccaagctaagctgtgctaaag
gttccaaacatttcaatttttaaaattaatattttcattttctgatgttt
actttacatgtcttcagagtgtgacaggagattgcagcctgtgatgttag
ttgtgtttagagtcccagctcactgtgtagggaaacttgacattccatac
ccagcttggtttggaggaggtattattacagggggaggagcttgttcttt
cggaggctgagtaccaaatctatccatccaagcagcagaaggtctactcc
aaacccttgttggttccatggctgcccatatactccatagggaggtactt
gctaccaatttgccatatactgtctgtactggctagttttgtgtcaactt
gacacagctggagttatcacagagaaaggagctttccattgagtaaatgc
ctctatgtgatccaactgtaaggcattttctcaattagtgatcaaggggg
gaaaggccctcttgtgggtggaaccatctctgggctggcagtccttgggt
tccataagagaacaggcttgagcagccaggaaaggcaagc

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctaagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagcattatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatta
aagggtggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaggattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgcccacagtcagctaatggatggatcacagggctccca
atggaaggagctagagaaagtacccaagagctaagggatctgcaacccta
ttagttgatcaacatatgactacagtaccccggagcctcttgactctact
gcatatgtattcaaaggatgtctagttcggcatcactgggtaagagagcc
atttgacatctaacttttattgccctagaaactggtacccagtcaagtgg
aatggtcagtctaagagtatctgcttacgttcgcatactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_73880471_73881305
seq2: B6Ng01-317J20.b_51_890 (reverse)

seq1  GCTTGCCTCTCCTGGCTTGCTC-AGCCTGTTCTCTTATGGAACC--AAGA  47
      |||||||| ||||||| ||||| |||||||||||||||||||||  | ||
seq2  GCTTGCCTTTCCTGGC-TGCTCAAGCCTGTTCTCTTATGGAACCCAAGGA  49

seq1  CTACCAGCCCAGAGATGGTTCCACCCACAAG-GGGCCTTT-CCCCCTTGA  95
      || |||||||||||||||||||||||||||| |||||||| |||||||||
seq2  CTGCCAGCCCAGAGATGGTTCCACCCACAAGAGGGCCTTTCCCCCCTTGA  99

seq1  TCACTAATTGAGAAAATGCCTTACAGTTGGATCACATAGAGGCATTTACT  145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAATTGAGAAAATGCCTTACAGTTGGATCACATAGAGGCATTTACT  149

seq1  CAATGG-AAGCTCCTTTCTCTGTGATAACTCCAGCTGTGTCAAGTTGACA  194
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGAAAGCTCCTTTCTCTGTGATAACTCCAGCTGTGTCAAGTTGACA  199

seq1  CAAAACTAGCCAGTACAGACAGTATATGGCAAATTGGTAGCAAGTACCTC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTAGCCAGTACAGACAGTATATGGCAAATTGGTAGCAAGTACCTC  249

seq1  CCTATGGAGTATATGGGCAGCCATGGAACCAACAAGGGTTTGGAGTAGAC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGGAGTATATGGGCAGCCATGGAACCAACAAGGGTTTGGAGTAGAC  299

seq1  CTTCTGCTGCTTGGATGGATAGATTTGGTACTCAGCCTCCGAAAGAACAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCTGCTTGGATGGATAGATTTGGTACTCAGCCTCCGAAAGAACAA  349

seq1  GCTCCTCCCCCTGTAATAATACCTCCTCCAAACCAAGCTGGGTATGGAAT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTCCCCCTGTAATAATACCTCCTCCAAACCAAGCTGGGTATGGAAT  399

seq1  GTCAAGTTTCCCTACACAGTGAGCTGGGACTCTAAACACAACTAACATCA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGTTTCCCTACACAGTGAGCTGGGACTCTAAACACAACTAACATCA  449

seq1  CAGGCTGCAATCTCCTGTCACACTCTGAAGACATGTAAAGTAAACATCAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGCAATCTCCTGTCACACTCTGAAGACATGTAAAGTAAACATCAG  499

seq1  AAAATGAAAATATTAATTTTAAAAATTGAAATGTTTGGAACCTTTAGCAC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAAAATATTAATTTTAAAAATTGAAATGTTTGGAACCTTTAGCAC  549

seq1  AGCTTAGCTTGGTGAAGGACTTGTGTCTTCTAGTTCTGCCTTTTGAAGTT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAGCTTGGTGAAGGACTTGTGTCTTCTAGTTCTGCCTTTTGAAGTT  599

seq1  TTTGATCATGATGGATATGAACATGACTTTTCTTTGTGTACAAAAAAACT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATCATGATGGATATGAACATGACTTTTCTTTGTGTACAAAAAAACT  649

seq1  AAAATAAAGTCAATAAAGAAAATTCTCACTATAAATTTTGATATAATAGG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAGTCAATAAAGAAAATTCTCACTATAAATTTTGATATAATAGG  699

seq1  ATAAATGGGTAATATGCTTTGGTCTTTAGACACTGTTCCATTTTTAACTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGGGTAATATGCTTTGGTCTTTAGACACTGTTCCATTTTTAACTT  749

seq1  GTTGTTCAGTATTTTAACTCACTGTGTTTTTAAAAGAGCAAAAAAGGGAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTCAGTATTTTAACTCACTGTGTTTTTAAAAGAGCAAAAAAGGGAG  799

seq1  TATCTTGAAAAACTTAGAATCACATCATTCATCCTGAATTC  835
      |||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTGAAAAACTTAGAATCACATCATTCATCCTGAATTC  840


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