BAC Information

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BAC

Clone NameB6Ng01-318E10
ChromosomeX (Build37)
Map Location 119,510,099 - 119,671,886
singlet/doubletdoublet
Overlap geneNap1l3
Upstream geneEG245575, LOC100039544
Downstream gene3110007F17Rik, LOC100039751, LOC100039763, LOC665281
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318E10.bB6Ng01-318E10.g
ACCGA108208GA108209
length1,0371,113
definitionB6Ng01-318E10.b B6Ng01-318E10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,671,416 - 119,671,886)(119,510,099 - 119,511,234)
sequence
gaattcaaaattatctaggagaaacacttctgtacatgtgattaaaggca
atgttaactaaacagaaaacgtttacccttaaagtcaaaaccttccaata
aatgacctagatataaatagagctgagaaaacagctggaattacctctct
cccattgattactctttgtgaattattctaatgctgctaaaatcctctat
tgccttcagacaccaatttcattggccttccagtgaagagttcttttcag
tgatacttgaggaattttctcattttattggttattttatttacttttca
aatattatcctccttcttggtttccctctttaaaccccacctcactccaa
cccctcccctgcctgcaagaggttgcttctctacccacatgcccactctt
gccccaccaccctagcattcccctatgctggtgtatcaagctttcacagg
accaagggcctcccttctcattgatatcaggcaaggccatcctctgctac
atatgcagctggaggcatgggtccatccatgtgtattctttggttggtgg
tttagttcctgggagctctagagaatctggttggttcatattttttcctc
ctatggggctggaaaactccttcagctccttcagtccttctgctaacttc
tccattgatattcccctgctcagtctgatggttggctagaagcatccaca
tacatatggcagaccctttcaggagacatcaatatcaggctcctgtcaac
aagtactttttggcatcagtaatagtgtctgggtttggtggctgcatgtg
ggatgaatccccagggggggtgagggggagtctcaaagtagccttacttc
agtctctgatccactctttgtccctgcattccttcagacaggagcaattc
taggttaaaatttttagaaggtgggtggttccatccctcaactggggacc
atgactaccactggatatggctctacaggttctcatttctcttcttgggt
atttcagctaatttagcactagattgggattgctgag

gaattccattcacattcttcctctgtaggctcatattctgcatttatgat
ctgaaaacgcttatcatatagaggcttattgagttcagcatactttcttt
caagatcatgaattgcccttaagaacaaggtgtctaccttgtcacactca
ttctgaatatttctgagtgcctgcacccgatttcttacggcttggggcag
cttatccaagaaaagtttcccggagggacgtcgctgggcccttctggaag
gctcaggtaccctcttctttcggttcaaatgactgccattgctgctgctg
ccactgctaccgctactgctactgctgctgctgctgctgctgctgctact
gctgctgctgctactgctgctgccgctgctgctgctgccgctgctgctgc
aactattggtactgctagagctattgctgtcagattcatccccagaatca
caagctgtgctagccatcgcctcttcagcaaccccatgggcaccaggttc
tgtgaccattttaggatccgcttctgccatactgttagccccgtacacct
atttaaggtggtgacaacagcagagatcgtgcacccagagacggacagaa
aaggactcacggatgctccagtggcggcggcggtggggggcggtggcagc
aggggcgaaggccggagaaggtcaggcggcggagactgcagcggcggcgg
ccgggatccagtggcaacacggactgcagcagctgtggcagtggcgcgat
gggggcggggtcacagaggtggcgcgcagaaaccgcagcagggaagcagc
ctggagccttagctacgaggcttgtcagccgcaatggacctgcgccgaga
cctgctgcagtccagtgacgcagtaccggactcagaaccgtctcctgggt
taggatgggcagcccctcccttgtgacagccctctgggttaaatcgttcc
caggatgccttcagttcacctccttatttgcggagaggactgatgactag
tgtgcgacaagaatggcaaagactacgccaatctcaggctctccacttcc
atatgcacctggtgccaggcgatgtaaccaagaacgttctctcccacctt
ttcaaaatctcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_119671416_119671886
seq2: B6Ng01-318E10.b_616_1080 (reverse)

seq1  CTCAGCAATCCCAATCTAGTGCTAAAATTAGCTGAAATACCCAAGAAAGA  50
      ||||||||||||||||||||||| ||||||||||||||||||||| ||||
seq2  CTCAGCAATCCCAATCTAGTGCT-AAATTAGCTGAAATACCCAAG-AAGA  48

seq1  GAAATGAGAACCTGTAGAGGCCATATCCAGTGGTTAGTCATGGTCCCCAG  100
      |||||||||||||||||| |||||||||||||| ||||||||||||||||
seq2  GAAATGAGAACCTGTAGA-GCCATATCCAGTGG-TAGTCATGGTCCCCAG  96

seq1  TTGAGGGATGGAACCACCCACCTTTCTAAAAATTTTAACCTAGAATTGCT  150
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTGAGGGATGGAACCACCCACC-TTCTAAAAATTTTAACCTAGAATTGCT  145

seq1  CCTGTCTGAAGGAAATGCAGGGACAAAGAGTGGATCAGAGACTGAAGTAA  200
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTGAAGG-AATGCAGGGACAAAGAGTGGATCAGAGACTGAAGTAA  194

seq1  GGCTACTTTGAGACTCCCCCTCACCCCCCCTGGGGATTCATCCCACATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACTTTGAGACTCCCCCTCACCCCCCCTGGGGATTCATCCCACATGC  244

seq1  AGCCACCAAACCCAGACACTATTACTGATGCCAAAAAGTACTTGTTGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACCAAACCCAGACACTATTACTGATGCCAAAAAGTACTTGTTGACA  294

seq1  GGAGCCTGATATTGATGTCTCCTGAAAGGGTCTGCCATATGTATGTGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCTGATATTGATGTCTCCTGAAAGGGTCTGCCATATGTATGTGGAT  344

seq1  GCTTCTAGCCAACCATCAGACTGAGCAGGGGAATATCAATGGAGAAGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTAGCCAACCATCAGACTGAGCAGGGGAATATCAATGGAGAAGTTA  394

seq1  GCAGAAGGACTGAAGGAGCTGAAGGAGTTTTCCAGCCCCATAGGAGGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGGACTGAAGGAGCTGAAGGAGTTTTCCAGCCCCATAGGAGGAAA  444

seq1  AAATATGAACCAACCAGATTC  471
      |||||||||||||||||||||
seq2  AAATATGAACCAACCAGATTC  465


seq1: chrX_119510099_119511234
seq2: B6Ng01-318E10.g_68_1180

seq1  GAATTCCATTCACATTCTTCCTCTGTAGGCTCATATTCTGCATTTATGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTCACATTCTTCCTCTGTAGGCTCATATTCTGCATTTATGAT  50

seq1  CTGAAAACGCTTATCATATAGAGGCTTATTGAGTTCAGCATACTTTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAACGCTTATCATATAGAGGCTTATTGAGTTCAGCATACTTTCTTT  100

seq1  CAAGATCATGAATTGCCCTTAAGAACAAGGTGTCTACCTTGTCACACTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATCATGAATTGCCCTTAAGAACAAGGTGTCTACCTTGTCACACTCA  150

seq1  TTCTGAATATTTCTGAGTGCCTGCACCCGATTTCTTACGGCTTGGGGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAATATTTCTGAGTGCCTGCACCCGATTTCTTACGGCTTGGGGCAG  200

seq1  CTTATCCAAGAAAAGTTTCCCGGAGGGACGTCGCTGGGCCCTTCTGGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCCAAGAAAAGTTTCCCGGAGGGACGTCGCTGGGCCCTTCTGGAAG  250

seq1  GCTCAGGTACCCTCTTCTTTCGGTTCAAATGACTGCCATTGCTGCTGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGTACCCTCTTCTTTCGGTTCAAATGACTGCCATTGCTGCTGCTG  300

seq1  CCACTGCTACCGCTACTGCTACTGCTGCTGCTGCTGCTGCTGCTGCTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGCTACCGCTACTGCTACTGCTGCTGCTGCTGCTGCTGCTGCTACT  350

seq1  GCTGCTGCTGCTACTGCTGCTGCCGCTGCTGCTGCTGCCGCTGCTGCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGCTGCTACTGCTGCTGCCGCTGCTGCTGCTGCCGCTGCTGCTGC  400

seq1  AACTATTGGTACTGCTAGAGCTATTGCTGTCAGATTCATCCCCAGAATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTGGTACTGCTAGAGCTATTGCTGTCAGATTCATCCCCAGAATCA  450

seq1  CAAGCTGTGCTAGCCATCGCCTCTTCAGCAACCCCATGGGCACCAGGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTGTGCTAGCCATCGCCTCTTCAGCAACCCCATGGGCACCAGGTTC  500

seq1  TGTGACCATTTTAGGATCCGCTTCTGCCATACTGTTAGCCCCGTACACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACCATTTTAGGATCCGCTTCTGCCATACTGTTAGCCCCGTACACCT  550

seq1  ATTTAAGGTGGTGACAACAGCAGAGATCGTGCACCCAGAGACGGACAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGGTGGTGACAACAGCAGAGATCGTGCACCCAGAGACGGACAGAA  600

seq1  AAGGACTCACGGATGCTCCAGTGGCGGCGGCGGTGGGGGGCGGTGGCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACTCACGGATGCTCCAGTGGCGGCGGCGGTGGGGGGCGGTGGCAGC  650

seq1  AGGGGCGAAGGCCGGAGAAGGTCAGGCGGCGGAGACTGCAGCGGCGGCGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCGAAGGCCGGAGAAGGTCAGGCGGCGGAGACTGCAGCGGCGGCGG  700

seq1  CCGGGATCCAGTGGCAACACGGACTGCAGCAGCTGTGGCAGTGGCGCGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGATCCAGTGGCAACACGGACTGCAGCAGCTGTGGCAGTGGCGCGAT  750

seq1  GGGGGCGGGGTCACAGAGGTGGCGCGCAGGAAACCGCAGCAGGGGAAGCA  800
      |||||||||||||||||||||||||||| |||||||||||| ||||||||
seq2  GGGGGCGGGGTCACAGAGGTGGCGCGCA-GAAACCGCAGCA-GGGAAGCA  798

seq1  GCCTGGAGCCTTAGCTACGAGGCTTGTCAGGCCGCAATGGACCTGCGCCG  850
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GCCTGGAGCCTTAGCTACGAGGCTTGTCA-GCCGCAATGGACCTGCGCCG  847

seq1  AGACCTGCTGCAGTCCAGTGACGCAGTACCGGACTCAGAACCGTCTCCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGCTGCAGTCCAGTGACGCAGTACCGGACTCAGAACCGTCTCCTG  897

seq1  GGTTAGGATGGGCAGCCCCTCCCTTGTTGACAGCCCTCTGGTTAAATTCG  950
      |||||||||||||||||||||||||| |||||||||||||| | || |||
seq2  GGTTAGGATGGGCAGCCCCTCCCTTG-TGACAGCCCTCTGGGTTAAATCG  946

seq1  TTCCCAGGATGCCTTCAGTTCA-CTCCTTATTTGCGGAGAGGACTTGATT  999
      |||||||||||||||||||||| ||||||||||||||||||||| ||| |
seq2  TTCCCAGGATGCCTTCAGTTCACCTCCTTATTTGCGGAGAGGAC-TGA-T  994

seq1  GACTAGTGTTGCGGCCAAAGAATGGCCAAAGACTAACGCCATTCCTCCAG  1049
      |||||||| |||| |  |||||||| |||||||| |||||| ||   |||
seq2  GACTAGTG-TGCGAC--AAGAATGG-CAAAGACT-ACGCCAATC--TCAG  1037

seq1  GCTCCTCCCACCTTCCCATATGCACCTGGGTTGCCAAGGCAAATGTACCC  1099
      ||||   ||||  | ||||||||||||||  |||| ||||  ||||| ||
seq2  GCTC--TCCAC--TTCCATATGCACCTGG--TGCC-AGGC-GATGTAACC  1079

seq1  AAAGACGGCTCCTCCCACCTTTTCAAAATTCTCTCCT  1136
      ||  |||    |||||||||||||||||   ||||||
seq2  AAGAACGTTCTCTCCCACCTTTTCAAAA---TCTCCT  1113


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