BAC Information

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BAC

Clone NameB6Ng01-323E07
ChromosomeX (Build37)
Map Location 25,087,361 - 25,088,510
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043216, EG546282, LOC100040417, LOC100040428, LOC100040433, Xmr, LOC100038968, LOC100038977, LOC100038997
Downstream geneLOC664810, EG382275, LOC100039030, LOC100039065, LOC100039078, LOC100039003, Slx
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323E07.bB6Ng01-323E07.g
ACCGA111894GA111895
length1,1521,202
definitionB6Ng01-323E07.b B6Ng01-323E07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatggtccatactgatacccaagatcattatgaggtaagtattc
tgagctagcactggataacagatcagtggctgagattctacatatcataa
ggaatcctgttgatgttcttgatttatcaatttcaccctcaatttcaagc
aaacaatatattttgatgtttgtggcctgtgagaagcagctatactgatg
tcagtgatgtattttgtgaacagaaattgggcaggaatccattatatcta
ttgctgatggagatgctgatgatggctatgatctgtgttgctgcttgaga
atctgataaattccaaagtccttactgatgcttgaattcatattgaggta
aattttcctagatggcactgaagatcagactgatgtctgagataatacct
gatacaggaaattctctttatgtttactgataaatggatatagccccaga
tgtttaaaatgaaatgtactgtgatgtctatgttactacctgaaacctga
agctatattaatgtcagagtggcatgataggaatggcaatcatgagggaa
tgtattcatattgatgatggagacctaatttatagtggtgatctgtgttg
gtgcgatctggtgaatttgacagtccatcctgattctcaaggtgatattg
aggtaagtattctgagctagcacttgcaatccatttgatgtttgagatca
aacattctacaggaaattctgttgaagactctaatacattcatgttggcc
catagttaatcatgtaatttataagatctatactactaccaaaagagcca
gagatgtcaaaaaagaaagaaaacaaaacaaaaacaaaatcaaaaacaaa
aacaaaaacaaacaaaacacaaaaaacaaaaaaacaaaaaaaactttcct
gccactggatgtgcatggccataatatcttctgcactcttaatcgatatt
aaacatagtgttgtatacctggcaacagataccatgggaacgatttcatt
gggcaccactttggtcagtgatcactgtgctactgagagccatgttaata
cagtaatccaagtgcctacagaactattgtttgatggtcaatcatcatca
gaggccttgtttaacccatagtaacttgatgaatctcggggagaaattgt
ta
gaattcattgtttagctctgtaccaaatttttaatggggttacttgaatt
tctgtggtccagcttcttgagctccttatatatattgaatattagtttcc
tatcagatttagaattagaaaaaaatcctttcccaatctgttggtggcct
ttttgtcttattgacagtgtcttttgccttacaaaaattttgcaatatta
tgaggtcccatttgtcaattcttgatcttactgcacaagccattgctgtt
ctgttcaggaattgttcctttttgcctataacttcgaggcttttacccac
tttgtcttctataaatttcagtctggttttatgtggagttctttgatgta
cttagacttgaaccttgtacaagaagataagaatggattaatttgcattc
ttctaaatgataacctcccattgtgccagcaccatttcttgaaaatgctt
tttttccaatggatggttttagctcccttgtcaaagttcaagtgaacaca
cgtgtgtgagttcattgctgggtcttcaattctattacattgatttcgct
ctcgctgtactagtaccatgcagtttttatcaaaattgctctgtagtaca
gcttgagatcaggcatggtaattccaccatagtttcttttatttttgaga
atagtttttgctctcttagctttcttgtcatccagatgaatatgcaaatt
gacctttctaactcagtgaagaattgatttggatttttgatgggaattgc
attgaatctgtagatttctgttggcaggatagccatttttctatattaat
ccggccaatctatgaacatggaatatctttccttctgagatcttaaattt
ctttcgtcagagacttgaaattcttgtcatacggatctttcacttcctta
gaatcacaccaaaggtagtttatatttttgtaactattgtgaaggtgttg
ttcactaatttcttctcagcctgttcagctttgagtagaagaaagggcac
tgattgtttgagttaatttttattatccagctactgtactgagcattatc
aagtcaggaattcctcctggtgaattttaaggtcactttattatatatac
aatcatcatctgccaataagataattttggactcgtcagtttatgccgtg
gatcttcatcttgttgttcagataattgctctctggcctaggatcatctt
cg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_25087361_25088510
seq2: B6Ng01-323E07.b_44_1195

seq1  GAATTCCATGGTCCATACTGATACCCAAGATCATTATGAGGTAAGTATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGGTCCATACTGATACCCAAGATCATTATGAGGTAAGTATTC  50

seq1  TGAGCTAGCACTGGATAACAGATCAGTGGCTGAGATTCTACATATCATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTAGCACTGGATAACAGATCAGTGGCTGAGATTCTACATATCATAA  100

seq1  GGAATCCTGTTGATGTTCTTGATTTATCAATTTCACCCTCAATTTCAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCCTGTTGATGTTCTTGATTTATCAATTTCACCCTCAATTTCAAGC  150

seq1  AAACAATATATTTTGATGTTTGTGGCCTGTGAGAAGCAGCTATACTGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATATATTTTGATGTTTGTGGCCTGTGAGAAGCAGCTATACTGATG  200

seq1  TCAGTGATGTATTTTGTGAACAGAAATTGGGCAGGAATCCATTATATCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGATGTATTTTGTGAACAGAAATTGGGCAGGAATCCATTATATCTA  250

seq1  TTGCTGATGGAGATGCTGATGATGGCTATGATCTGTGTTGCTGCTTGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGATGGAGATGCTGATGATGGCTATGATCTGTGTTGCTGCTTGAGA  300

seq1  ATCTGATAAATTCCAAAGTCCTTACTGATGCTTGAATTCATATTGAGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGATAAATTCCAAAGTCCTTACTGATGCTTGAATTCATATTGAGGTA  350

seq1  AATTTTCCTAGATGGCACTGAAGATCAGACTGATGTCTGAGATAATACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCCTAGATGGCACTGAAGATCAGACTGATGTCTGAGATAATACCT  400

seq1  GATACAGGAAATTCTCTTTATGTTTACTGATAAATGGATATAGCCCCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAGGAAATTCTCTTTATGTTTACTGATAAATGGATATAGCCCCAGA  450

seq1  TGTTTAAAATGAAATGTACTGTGATGTCTATGTTACTACCTGAAACCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAAATGAAATGTACTGTGATGTCTATGTTACTACCTGAAACCTGA  500

seq1  AGCTATATTAATGTCAGAGTGGCATGATAGGAATGGCAATCATGAGGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATATTAATGTCAGAGTGGCATGATAGGAATGGCAATCATGAGGGAA  550

seq1  TGTATTCATATTGATGATGGAGACCTAATTTATAGTGGTGATCTGTGTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCATATTGATGATGGAGACCTAATTTATAGTGGTGATCTGTGTTG  600

seq1  GTGCGATCTGGTGAATTTGACAGTCCATCCTGATTCTCAAGGTGATATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGATCTGGTGAATTTGACAGTCCATCCTGATTCTCAAGGTGATATTG  650

seq1  AGGTAAGTATTCTGAGCTAGCACTTGCAATCCATTTGATGTTTGAGATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAGTATTCTGAGCTAGCACTTGCAATCCATTTGATGTTTGAGATCA  700

seq1  AACATTCTACAGGAAATTCTGTTGAAGACTCTAATACATTCATGTTGGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCTACAGGAAATTCTGTTGAAGACTCTAATACATTCATGTTGGCC  750

seq1  CATAGTTAATCATGTAATTTATAAGATCTATACTACTACCAAAAGAGCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTTAATCATGTAATTTATAAGATCTATACTACTACCAAAAGAGCCA  800

seq1  GAGATGTCAAAAAAGAAAGAAAACAAAACAAAAACAAAAACAAAAACAAA  850
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GAGATGTCAAAAAAGAAAGAAAACAAAACAAAAACAAAATCAAAAACAAA  850

seq1  AACAAAAACAAAACAAAACACAAAAAACAAAAAAACAAAAAAAAACTTTC  900
      ||||||||| |||||||||||||||||||||||||| |||||||||||||
seq2  AACAAAAAC-AAACAAAACACAAAAAACAAAAAAAC-AAAAAAAACTTTC  898

seq1  CTGCCACTGGATGTGCATGGCCATAATATCTTCTGCACTCTTAATCGATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCACTGGATGTGCATGGCCATAATATCTTCTGCACTCTTAATCGATA  948

seq1  TTAAACATAGTGTTGTATACCTGGCAACAGATACCAT-GGAACGATTTCA  999
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTAAACATAGTGTTGTATACCTGGCAACAGATACCATGGGAACGATTTCA  998

seq1  TTGGCAACCACTTT-GTCAGTGATCACTGTGCTACTGAGAGCCATGTTAA  1048
      ||||  |||||||| |||||||||||||||||||||||||||||||||||
seq2  TTGGGCACCACTTTGGTCAGTGATCACTGTGCTACTGAGAGCCATGTTAA  1048

seq1  TAACAGTAATCCAAAGTGCCTACAGAAACTAT--GTTGAT-GTCAATCAT  1095
      | |||||||||| |||||||||||| ||||||   ||||| |||||||||
seq2  T-ACAGTAATCC-AAGTGCCTACAG-AACTATTGTTTGATGGTCAATCAT  1095

seq1  CATCCAGAAGCCCTGTTTAAACCCATAGT-ACATGATGATTCT-GGGGAG  1143
      ||| |||| ||| ||||| |||||||||| || |||||| ||| ||||||
seq2  CAT-CAGAGGCCTTGTTT-AACCCATAGTAACTTGATGAATCTCGGGGAG  1143

seq1  --ATTGTTA  1150
        |||||||
seq2  AAATTGTTA  1152