BAC Information

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BAC

Clone NameB6Ng01-325D05
ChromosomeX (Build37)
Map Location 118,866,195 - 118,867,341
singlet/doubletsinglet
Overlap genenone
Upstream genePcdh11x, LOC245576, LOC385419, EG434907
Downstream geneEG245575, LOC100039544, Nap1l3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325D05.bB6Ng01-325D05.g
ACCGA113320GA113321
length1,1471,122
definitionB6Ng01-325D05.b B6Ng01-325D05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagttcttcaaacccaagtaaagatagagagatacaacttcacaa
tttttgtgcttggctttgcatgcaagttttatgtcacttatgcttacatt
tgtatcataaacacaataataatagtagtagtaataatactaataagtaa
ttaatattttagaaatgagaaattgaaagtagcatatgaattcagagaaa
ggtatgcatattattgaggcaatgatatttaagaaaattagtgcaattaa
agaagaaaatgaaagaataaatgttctcagtatgctgaagctatggtcga
aggagtattatttaactctaattccacagataatagcatttgaaataaga
aagaaaaatctttgaagagagatagcatcaaagacagaaggaagatactt
tgaaatactgtcttggaaaagcaatcattctcctgctagcttcaactaga
tagactatattttatccaggttatctgcttgccagcattcagccacagag
gatatttagtactgctagaagcagtgatctgagcaacaacctctgctgcc
agaagatgtgggaaatctaatatttatctaaattaaccatgacatcttta
gagaacactctgggtcattgccaaagcattgttctgttagccaagaagaa
gctattaacaagacagatgacaaacaaaagataacagtgaaaatcatgtg
gaccctttttaaaacataggtttttttaccaaagctcatctaactgcttt
tctgttttcctgtgatatcagaggaaccagacagtgaaaataaacagctt
atttatggagaattatagtcattagacattcttttgagaactatcccaac
tgtgttttatcctcatcattctttttgcttattgaattcaattacagaaa
atattcaccattaaaggcattcttagtggaattaaggagaaattttacat
tgagaagtccagtaacgaggaactacttttgaattccagtaacaaatttg
gttactgaataatatgaaaaaggtatgactattaatatttcatccaattt
tgattgaactagttgtttgacttcatttacagaatgctctgctcaggctt
aatctaatgacttcatcttttaatttgttctaacctattttcccttt

gaattctttgttttagaattctttgagttctttgtatatattggatatta
cccccttataggatttaggattcgtaaaaatcttttcccaatctcttggt
tgcctttttgtcttattgacagtgtcctttgtcttactgaagttttgcaa
ttttatgaggtcccatttgttgattcttgatcttacagcacaagcaattg
ccattctcttcaggatttttccccctgtgccacatcatcgaggcactttc
tcctctataagttttactgtctggttttatgtggagttccttgtttgttt
tttgttttgttttgttttgttttgaaaaataagatagaaaaagtctcatc
caaatgaacaaaaacgcaaagatagaaaaatcattccataatccaaggat
ccatagattctaagtaacaaggaaaacttaggggggatataaggatctcc
ttggtaaggggaaatataatagattttgcagatgagtttgagtccatttg
gaagaagaagggattacacgggtagaggggcaaatatactggaataaatt
actggaattgtacacatttctagactaaggcacaaactaagtgcaatacc
aactccatgtaatttactagggtaaccccagcaaaggctgcaagataggg
ggcaaagaatgtgagctgtatatcttctataaccaatcaaaggctcagat
ccagagatttggacacccaccaagccacagaaacttttacctacagtttt
tcctgcctgtagagtgttctgattctggaacttaacagaattgtcaccag
tgagaacagaaaatcttcattcaaacacttatgagagtagacacagactc
cagtgatcaaattagaaagagctcagaggatcctgcaggggaggtggggg
aaaggatcacagggaacacatagttcaggtacaaatccagatgtggatct
cttacatatgttttcttcatctatctatcatcatcatcatctatctatct
atctatcatcatcatcatctatcatcatcaatcatatcatgatcaatcaa
tacatcatttcgtaccaatactatatcatcatcctaaatgggtggcaatt
atatggtgtgtgggtgaggtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_118866195_118867341
seq2: B6Ng01-325D05.b_48_1194

seq1  GAATTCAGTTCTTCAAACCCAAGTAAAGATAGAGAGATACAACTTCACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCTTCAAACCCAAGTAAAGATAGAGAGATACAACTTCACAA  50

seq1  TTTTTGTGCTTGGCTTTGCATGCAAGTTTTATGTCACTTATGCTTACATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTGCTTGGCTTTGCATGCAAGTTTTATGTCACTTATGCTTACATT  100

seq1  TGTATCATAAACACAATAATAATAGTAGTAGTAATAATACTAATAAGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCATAAACACAATAATAATAGTAGTAGTAATAATACTAATAAGTAA  150

seq1  TTAATATTTTAGAAATGAGAAATTGAAAGTAGCATATGAATTCAGAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATTTTAGAAATGAGAAATTGAAAGTAGCATATGAATTCAGAGAAA  200

seq1  GGTATGCATATTATTGAGGCAATGATATTTAAGAAAATTAGTGCAATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGCATATTATTGAGGCAATGATATTTAAGAAAATTAGTGCAATTAA  250

seq1  AGAAGAAAATGAAAGAATAAATGTTCTCAGTATGCTGAAGCTATGGTCGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAATGAAAGAATAAATGTTCTCAGTATGCTGAAGCTATGGTCGA  300

seq1  AGGAGTATTATTTAACTCTAATTCCACAGATAATAGCATTTGAAATAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTATTATTTAACTCTAATTCCACAGATAATAGCATTTGAAATAAGA  350

seq1  AAGAAAAATCTTTGAAGAGAGATAGCATCAAAGACAGAAGGAAGATACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAATCTTTGAAGAGAGATAGCATCAAAGACAGAAGGAAGATACTT  400

seq1  TGAAATACTGTCTTGGAAAAGCAATCATTCTCCTGCTAGCTTCAACTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATACTGTCTTGGAAAAGCAATCATTCTCCTGCTAGCTTCAACTAGA  450

seq1  TAGACTATATTTTATCCAGGTTATCTGCTTGCCAGCATTCAGCCACAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTATATTTTATCCAGGTTATCTGCTTGCCAGCATTCAGCCACAGAG  500

seq1  GATATTTAGTACTGCTAGAAGCAGTGATCTGAGCAACAACCTCTGCTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTAGTACTGCTAGAAGCAGTGATCTGAGCAACAACCTCTGCTGCC  550

seq1  AGAAGATGTGGGAAATCTAATATTTATCTAAATTAACCATGACATCTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATGTGGGAAATCTAATATTTATCTAAATTAACCATGACATCTTTA  600

seq1  GAGAACACTCTGGGTCATTGCCAAAGCATTGTTCTGTTAGCCAAGAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACACTCTGGGTCATTGCCAAAGCATTGTTCTGTTAGCCAAGAAGAA  650

seq1  GCTATTAACAAGACAGATGACAAACAAAAGATAACAGTGAAAATCATGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTAACAAGACAGATGACAAACAAAAGATAACAGTGAAAATCATGTG  700

seq1  GACCCTTTTTAAAACATAGGTTTTTTTACCAAAGCTCATCTAACTGCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTTTTTAAAACATAGGTTTTTTTACCAAAGCTCATCTAACTGCTTT  750

seq1  TCTGTTTTCCTGTGATATCAGAGGAACCAGACAGTGAAAATAAACAGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTTCCTGTGATATCAGAGGAACCAGACAGTGAAAATAAACAGCTT  800

seq1  ATTTATGGAGAATTATAGTCATTAGACATTCTTTTGAGAACTATCCCAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGGAGAATTATAGTCATTAGACATTCTTTTGAGAACTATCCCAAC  850

seq1  TGTGTTTTATCCTCATCATTCTTTTTGCTTATTGAATTCAATTACAGAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTTATCCTCATCATTCTTTTTGCTTATTGAATTCAATTACAGAAA  900

seq1  ATATTCACCATTAAAGGCATTCTTAGTGGAATTAAGGAGAAATTTTACAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCACCATTAAAGGCATTCTTAGTGGAATTAAGGAGAAATTTTACAT  950

seq1  TGAGAAGTCCAGTAACGAGGAACTACTTTTGAATTCCAGTAACAAATTTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGTCCAGTAACGAGGAACTACTTTTGAATTCCAGTAACAAATTTG  1000

seq1  GTTACTGAATAATATGAAAAAGGTATGACTATTAATATTTCATCCAATTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTGAATAATATGAAAAAGGTATGACTATTAATATTTCATCCAATTT  1050

seq1  TGATTGAACTAGGTTGTTTGACTTCATTTACAG-ATGCTCTGCTTCAGGC  1099
      ||||||||||| ||||||||||||||||||||| ||||||||| ||||||
seq2  TGATTGAACTA-GTTGTTTGACTTCATTTACAGAATGCTCTGC-TCAGGC  1098

seq1  TT-ATCTAATGACTTCATCTTTTAATTTGTTCTAACCTATTTTCCCTTT  1147
      || ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTAATGACTTCATCTTTTAATTTGTTCTAACCTATTTTCCCTTT  1147


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