BAC Information

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BAC

Clone NameB6Ng01-325L20
ChromosomeX (Build37)
Map Location 98,450,844 - 98,451,758
singlet/doubletsinglet
Overlap geneMllt7
Upstream geneEda, Dgat2l4, Otud6a, Igbp1, LOC668257, Dgat2l3, LOC620734, P2ry4, Arr3, Pdzd11, Kif4, Gdpd2, Dlg3, Tex11, LOC668271, LOC100042392, Slc7a3, Snx12
Downstream geneGm614, Il2rg, Med12, Nlgn3, LOC100042407, Gjb1, Zmym3, Nono, Itgb1bp2, LOC620837, Taf1, Ogt, LOC620865, LOC668291, Cxcr3, LOC632454, LOC668302, EG212753, 8030474K03Rik, LOC668308, LOC100042465, H3f3a-ps1, EG621083, Rgag4, LOC100042480, LOC331476, Pin4, LOC670921, Ercc6l, LOC668318, Rps4x, LOC100043080, Cited1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325L20.bB6Ng01-325L20.g
ACCGA113720GA113721
length110913
definitionB6Ng01-325L20.b B6Ng01-325L20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttttagacataaatgtttaagagaggcccattggacacgcaaactttata
tgccccagtacaggggaacgccagggccaaaaaaggggagtgggtgggta
ggggagtggg
gaattctctactcgctactcagcactttggcttgagctgctccaaacatt
tattcccacagagaagtctttatcctatgtacagcaggaactgtgtggat
tctccaccggcacctagccttccctcctccctcccctcccacccaacacc
ttttggcccattcctgcgggattactcggattccctgctcgcctcccaat
acctcagtgaacagaactgttctacgattgctctgcccaagagggagtgg
gcggtgaaggggggcaaagtggttggtatccatggggaaaggtagcgacc
ttgtgcactaaggaaagaggcccgcaagctgctatctgcctcagtttacc
ttctcctgacgaaaatccttccttgtaaggcgctctccaaactcacgggg
aaagtctttgttcaggaatactactcatggagaaaggaggtatcatatag
ctttgactttcgagtccaagttggtccttggtctttcttgaagaaactgg
gaagatctcaaacggtaactctgaaaacttcgccagagaaatacggactc
taatcacaaaactaaggagggttcagcccgtatccatgccttgtatctct
ctctgtaggtggtttgtgttagtgtaccaagtacagcggacagaatggac
cttcacgtagacgttagagtgagggagcagatctacaatgtgcggagggg
ccagactgacagaagatgggacagctgaccgagacccttggcgctatttc
tgggtagactgcatgccacaatctgagctcacaaagagctttccctcctt
ggacgcagcctgcacagcttgtttttcttttcccttaagttgattttcca
gggtagaatgaccacgagatgcttgttacactgggagtagtcccttctat
gacttaacgtaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_98450844_98451758
seq2: B6Ng01-325L20.g_68_980

seq1  GAATTCTCTACTCGCTACTCAGCACTTTGGCTTGAGCTGCTCCAAACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTACTCGCTACTCAGCACTTTGGCTTGAGCTGCTCCAAACATT  50

seq1  TATTCCCACAGAGAAGTCTTTATCCTATGTACAGCAGGAACTGTGTGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCCACAGAGAAGTCTTTATCCTATGTACAGCAGGAACTGTGTGGAT  100

seq1  TCTCCACCGGCACCTAGCCTTCCCTCCTCCCTCCCCTCCCACCCAACACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACCGGCACCTAGCCTTCCCTCCTCCCTCCCCTCCCACCCAACACC  150

seq1  TTTTGGCCCATTCCTGCGGGATTACTCGGATTCCCTGCTCGCCTCCCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGCCCATTCCTGCGGGATTACTCGGATTCCCTGCTCGCCTCCCAAT  200

seq1  ACCTCAGTGAACAGAACTGTTCTACGATTGCTCTGCCCAAGAGGGAGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGTGAACAGAACTGTTCTACGATTGCTCTGCCCAAGAGGGAGTGG  250

seq1  GCGGTGAAGGGGGGCAAAGTGGTTGGTATCCATGGGGAAAGGTAGCGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTGAAGGGGGGCAAAGTGGTTGGTATCCATGGGGAAAGGTAGCGACC  300

seq1  TTGTGCACTAAGGAAAGAGGCCCGCAAGCTGCTATCTGCCTCAGTTTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCACTAAGGAAAGAGGCCCGCAAGCTGCTATCTGCCTCAGTTTACC  350

seq1  TTCTCCTGACGAAAATCCTTCCTTGTAAGGCGCTCTCCAAACTCACGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTGACGAAAATCCTTCCTTGTAAGGCGCTCTCCAAACTCACGGGG  400

seq1  AAAGTCTTTGTTCAGGAATACTACTCATGGAGAAAGGAGGTATCATATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTTTGTTCAGGAATACTACTCATGGAGAAAGGAGGTATCATATAG  450

seq1  CTTTGACTTTCGAGTCCAAGTTGGTCCTTGGTCTTTCTTGAAGAAACTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACTTTCGAGTCCAAGTTGGTCCTTGGTCTTTCTTGAAGAAACTGG  500

seq1  GAAGATCTCAAACGGTAACTCTGAAAACTTCGCCAGAGAAATACGGACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATCTCAAACGGTAACTCTGAAAACTTCGCCAGAGAAATACGGACTC  550

seq1  TAATCACAAAACTAAGGAGGGTTCAGCCCGTATCCATGCCTTGTATCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCACAAAACTAAGGAGGGTTCAGCCCGTATCCATGCCTTGTATCTCT  600

seq1  CTCTGTAGGTGGTTTGTGTTAGTGTACCAAGTACAGCGGACAGAATGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTAGGTGGTTTGTGTTAGTGTACCAAGTACAGCGGACAGAATGGAC  650

seq1  CTTCACGTAGACGTTAGAGTGAGGGAGCAGATCTACAATGTGCGGAGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACGTAGACGTTAGAGTGAGGGAGCAGATCTACAATGTGCGGAGGGG  700

seq1  CCAGACTGAACAGAAGATGGGACAGCTGACCGAGACCCTTGGCGCTATTT  750
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACTG-ACAGAAGATGGGACAGCTGACCGAGACCCTTGGCGCTATTT  749

seq1  CTGGGTAGACTGCCATGCCACAATCTGAAGCTCACAAAGAGC-TTCCCTC  799
      |||||||||||| |||||||||||||| |||||||||||||| |||||||
seq2  CTGGGTAGACTG-CATGCCACAATCTG-AGCTCACAAAGAGCTTTCCCTC  797

seq1  CTTGGACGCAGCCTGCACAGC-TGTTTTTCTTTTCCCTTAAGTTGATTTT  848
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTTGGACGCAGCCTGCACAGCTTGTTTTTCTTTTCCCTTAAGTTGATTTT  847

seq1  CCAGGGTAGAATGACCACGAG-TGCTTGTTACACTGGGAGTAGTCCCTTC  897
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCAGGGTAGAATGACCACGAGATGCTTGTTACACTGGGAGTAGTCCCTTC  897

seq1  TTATGACTTACACGTAAC  915
       ||||||||| |||||||
seq2  -TATGACTTA-ACGTAAC  913