BAC Information

Click to search

BAC

Clone NameB6Ng01-329A09
ChromosomeX (Build37)
Map Location 23,296,809 - 23,297,952
singlet/doubletsinglet
Overlap geneWdr44
Upstream geneKlhl13, EG635719
Downstream geneEG236749, EG214450, EG245376, LOC546271, LOC100043957, LOC100043206, LOC669000, LOC629204, EG546272, LOC100043216
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329A09.bB6Ng01-329A09.g
ACCGA116118GA116119
length1,149703
definitionB6Ng01-329A09.b B6Ng01-329A09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagttactatgtgaagaactgtaggttaccttggatggcttgat
taaaatagaaataaaaatagaaaagctgtataccaagagaatttgtgaac
tggagagtaatcattatgaaaagggtactaaatgaaccccactgtttcac
acgaggccaaaacccattttatgaaatcccctgcctgctctctggcatgt
acagaaaggaaatcctcctcagcacactattagggtagagctggcccctc
atcaaactatgacctcattctgagatgcctgtccttgtggctatacctgt
agggaaaaaaaagaaagcaagctaaaactagagagcacactgctcaaaac
aggcccaggcctcatgactccccagataccttggtctctgagcatagcct
aggctgcagaccattggttagacagtccccgctataggacctggcactat
gcatctaagccagactcctttctggcatgaccaccagccctcttagagtc
ctaggatcactgaagtagtccttgcagcctctccaggttccatttgtgta
tcacgctcacctgttgtgaagcatcactcttgagcatttagtaaaataaa
ttagttccctagggaactgatatttcttatgttattatcatggtgataca
atcaacaaaattcaaaccatgtaagttggtacaagataagcaacatagtt
tcttcggcacatgaaacaaaataaataaacattagaaggcacacctctga
ttgggttaaatagacatttcaactgatcaatcagtgggtaaaagacaatg
cccctcaaccttaattcagtccctggatggaaaagagaaccaactactgc
aaattatcccttgaccgccacacacacacttgctgtacacacatcactgc
tcaaccaaagacctgattttaaaaaagacgatgcaacttaagaaatttga
gtgtgagctataaataattaggacttgttaaattttatgatattgtggtt
atgttttaaagagaagtctatcattttagatgcatattgaaatggttaat
ggataaaaacgaaatagtgtcatttgcatcaaagtattctgaataacaga
gtagaaagaagagtggtttatctatcaatgctaacaatagttaggcata

gaattcatgaaattcttaggcaaagtgatggaactagaaaatatcaccct
gagtgaggtaacccaatcacaaaagaacacacgtgtatgcactcactgat
aagtggatattagcccaaaagtcctaagatagaactcacagaccacatga
agctcctgaagaagaccaaagtatgggtgctgcggctcttcttagaaggg
ggaaacaaatactcaagggagcaaatatggatacaaagtgtagagcagag
actgaaggaaagtccatccagagactgccccacctggggatccttcccat
atatagtctccaaaaccagacacttgtggatgccaagaaatgcttgctga
aaggagcctgatatggctgtctcctgagaggccctgccagagtcttacaa
atgcagaggtggatgcttgcagccaaccactggactaagcgtggggtccc
caatggagaagataaaggactgaaggagttgaaggggattgcaaccccat
agggagaacaatatccaccatccaggcccctacagctcccagggactaag
tcaccaacgaaggagtatacatggctccagctgtatatgtagcagaggat
ggccttgtcaggcatcaatgggaggagagatctttggtcctattaaaggc
ttgatagatgccccagtgtatggggaaatgaaggggtgggaggcgggagt
agg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_23296809_23297952
seq2: B6Ng01-329A09.b_45_1193

seq1  GAATTCCAGTTACTATGTGAAGAACTGTAGGTTACCTTGGATGGCTTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTTACTATGTGAAGAACTGTAGGTTACCTTGGATGGCTTGAT  50

seq1  TAAAATAGAAATAAAAATAGAAAAGCTGTATACCAAGAGAATTTGTGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAGAAATAAAAATAGAAAAGCTGTATACCAAGAGAATTTGTGAAC  100

seq1  TGGAGAGTAATCATTATGAAAAGGGTACTAAATGAACCCCACTGTTTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGTAATCATTATGAAAAGGGTACTAAATGAACCCCACTGTTTCAC  150

seq1  ACGAGGCCAAAACCCATTTTATGAAATCCCCTGCCTGCTCTCTGGCATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGGCCAAAACCCATTTTATGAAATCCCCTGCCTGCTCTCTGGCATGT  200

seq1  ACAGAAAGGAAATCCTCCTCAGCACACTATTAGGGTAGAGCTGGCCCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAGGAAATCCTCCTCAGCACACTATTAGGGTAGAGCTGGCCCCTC  250

seq1  ATCAAACTATGACCTCATTCTGAGATGCCTGTCCTTGTGGCTATACCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAACTATGACCTCATTCTGAGATGCCTGTCCTTGTGGCTATACCTGT  300

seq1  AGGGAAAAAAAAGAAAGCAAGCTAAAACTAGAGAGCACACTGCTCAAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAAAAAAGAAAGCAAGCTAAAACTAGAGAGCACACTGCTCAAAAC  350

seq1  AGGCCCAGGCCTCATGACTCCCCAGATACCTTGGTCTCTGAGCATAGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCAGGCCTCATGACTCCCCAGATACCTTGGTCTCTGAGCATAGCCT  400

seq1  AGGCTGCAGACCATTGGTTAGACAGTCCCCGCTATAGGACCTGGCACTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGCAGACCATTGGTTAGACAGTCCCCGCTATAGGACCTGGCACTAT  450

seq1  GCATCTAAGCCAGACTCCTTTCTGGCATGACCACCAGCCCTCTTAGAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTAAGCCAGACTCCTTTCTGGCATGACCACCAGCCCTCTTAGAGTC  500

seq1  CTAGGATCACTGAAGTAGTCCTTGCAGCCTCTCCAGGTTCCATTTGTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGATCACTGAAGTAGTCCTTGCAGCCTCTCCAGGTTCCATTTGTGTA  550

seq1  TCACGCTCACCTGTTGTGAAGCATCACTCTTGAGCATTTAGTAAAATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGCTCACCTGTTGTGAAGCATCACTCTTGAGCATTTAGTAAAATAAA  600

seq1  TTAGTTCCCTAGGGAACTGATATTTCTTATGTTATTATCATGGTGATACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTCCCTAGGGAACTGATATTTCTTATGTTATTATCATGGTGATACA  650

seq1  ATCAACAAAATTCAAACCATGTAAGTTGGTACAAGATAAGCAACATAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACAAAATTCAAACCATGTAAGTTGGTACAAGATAAGCAACATAGTT  700

seq1  TCTTCGGCACATGAAACAAAATAAATAAACATTAGAAGGCACACCTCTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCGGCACATGAAACAAAATAAATAAACATTAGAAGGCACACCTCTGA  750

seq1  TTGGGTTAAATAGACATTTCAACTGATCAATCAGTGGGTAAAAGACAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTAAATAGACATTTCAACTGATCAATCAGTGGGTAAAAGACAATG  800

seq1  CCCCTCAACCTTAATTCAGTCCCTGGATGGAAAAGAGAACCAACTACTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCAACCTTAATTCAGTCCCTGGATGGAAAAGAGAACCAACTACTGC  850

seq1  AAATTATCCCTTGACCGCCACACACACACTTGCTGTACACACATCACTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATCCCTTGACCGCCACACACACACTTGCTGTACACACATCACTGC  900

seq1  TCAACCAAAGACCTGATTTTAAAAAAGACGATGCAACTTAAGAAATTTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCAAAGACCTGATTTTAAAAAAGACGATGCAACTTAAGAAATTTGA  950

seq1  GTGTGAGCTATAAATAATTAGGACTTGTTAAATTTTATGATATTGTGGTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGCTATAAATAATTAGGACTTGTTAAATTTTATGATATTGTGGTT  1000

seq1  ATGTTTTAAAGAGAAGTCTATCATTTTAGATGCATATTGAAATGGTTAAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTAAAGAGAAGTCTATCATTTTAGATGCATATTGAAATGGTTAAT  1050

seq1  GGATAAAAAGGAAATAGTGTCATTTGCATCAAAGTA-TCTG-ATAACAGA  1098
      ||||||||| |||||||||||||||||||||||||| |||| ||||||||
seq2  GGATAAAAACGAAATAGTGTCATTTGCATCAAAGTATTCTGAATAACAGA  1100

seq1  GTAGAGAGAAGAGTG--TTATCTATCATTGCTAAACATAGTTA-GCATA  1144
      ||||| |||||||||  |||||||||| ||||||  ||||||| |||||
seq2  GTAGAAAGAAGAGTGGTTTATCTATCAATGCTAACAATAGTTAGGCATA  1149


| Home | SequenceCutter | Blast | Download |