BAC Information

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BAC

Clone NameB6Ng01-329F08
ChromosomeX (Build37)
Map Location 47,573,470 - 47,682,276
singlet/doubletdoublet
Overlap geneEG665816
Upstream geneEnox2, 1100001E04Rik, LOC100041697, Olfr1320, Olfr1321, Igsf1, Olfr1322, LOC100040344, Olfr1323
Downstream geneOlfr1324, LOC100041788, 6720401G13Rik, 2610018G03Rik, LOC100040422, Rap2c, LOC385355, Mbnl3, LOC665866, LOC385356
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329F08.bB6Ng01-329F08.g
ACCGA116325GA116326
length1,0151,007
definitionB6Ng01-329F08.b B6Ng01-329F08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,573,470 - 47,574,101)(47,681,268 - 47,682,276)
sequence
gaattcctttgtgaaacaaccattttcttctcagaagatagcatttcaca
gctctcctcttcatccttcaactcttagattctttccaggtcctttcttg
tatgatgttccccttttactgctccttttttttttgaagtcttttctgag
gaatatgataagaaaaggaaataaaaaagcatacatgtaaaggagaaaga
agacaaataatatctaattgcagttaacatggttatatacttgaaagacc
caagtactcaaacagaaaattcttagatttgataaacacattaaacaaac
tggcaaagtcgacataaaagactatgtagctttgctatgtaacaataata
aagttattaatacaggagttaattgaaaaattgacttatgattgctttac
aaaatataatacttaaaaataaactgaattgcattggcccacccatcttc
cctgtacattaagacttcttggacccccccagatgtcctgaccagtgtgc
gatcccctgtagatctccattgtcccacaatatctgcacctaccttcatc
aaacctactgatcaggaaacatgcaacacccatcttacctgcctattgag
tccactgggtaccctcaaataccctgagcagcctactattctcactggac
tctcattctcctgtgacctccctgcctacattcattaacctgctgatctg
gaaacatacagcccaagaatgtgcatcagagacctgccataccaggatca
ttgaagttaggctccctctcagtacctagtacaaaaatatagagggacta
aagccatccacatggctaaagggcttcaaaagaacacaatagacataaga
tagggcaatatgacaccttcagaacacagctacccaactacagcatgccc
tggatattctaacacaacccaaaacacaagaaaatgaccatacatccaat
cttataagatgatagtgggcctttaaagaggaaatgaatgaataccttaa
aaagataccagaaaa
gaattcatgaaggtctactccactgccacccctttaccacaatagaagat
tttatttatttatttatttatttatttatttatttatttatttatttgga
aaagagcatgatttgaagcatcagtgtctcaacagtgaaagcttacctga
gaatcaagaatctagaagttctcaaccatgggccaatgttctgacaaaat
atattttatcagtgatttctacacatagaccctcattatggatttttttt
tactttagagcataatgaactttattaaagtcttaattttcagtaaaatg
taccaagttaaagtgaacagatcaatgagtgggaacaaactgtgtattcc
catgtaatatgatttcagaagtaaatacagagcacttccatcactctcta
atcttatgcctgtatctcagtcagttgatccactactagtcttaaatgat
ttgctttctgctaatatatgctaatttctcaggaatttgataagacttat
gtaattcagagtatccaatacagatagataataaattcagtgagccaatg
acatacaaagtctcacccaggatgcagctaagcatgtgattgtgaactgt
atatgagccaaaatgtttgtgacctagaagaaatattagtaaaattaaaa
tcctcaaaaagcaattttataatatttctatgttttagggtatgagacca
tgaaacattataaaaatgaacatcgaaattatatttaattacatgttaga
gacctgtactaagtagtaaattcctacacacttaagtgaaatgtctatct
ctcaaagtttcaaatgaaaagtacatttctgcttaaaatttggtctcaga
ggaaagttaactagatactacaacatgttatttagcaacattaatctgca
gtttggaaaaatatggggtttggagttgtggatatatttttaatagtctc
tatcatgagcagtgtaacagggcttaatgccatgacctaatctgtaacat
gtacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_47573470_47574101
seq2: B6Ng01-329F08.b_40_671

seq1  GAATTCCTTTGTGAAACAACCATTTTCTTCTCAGAAGATAGCATTTCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTGTGAAACAACCATTTTCTTCTCAGAAGATAGCATTTCACA  50

seq1  GCTCTCCTCTTCATCCTTCAACTCTTAGATTCTTTCCAGGTCCTTTCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCCTCTTCATCCTTCAACTCTTAGATTCTTTCCAGGTCCTTTCTTG  100

seq1  TATGATGTTCCCCTTTTACTGCTCCTTTTTTTTTTGAAGTCTTTTCTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATGTTCCCCTTTTACTGCTCCTTTTTTTTTTGAAGTCTTTTCTGAG  150

seq1  GAATATGATAAGAAAAGGAAATAAAAAAGCATACATGTAAAGGAGAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATGATAAGAAAAGGAAATAAAAAAGCATACATGTAAAGGAGAAAGA  200

seq1  AGACAAATAATATCTAATTGCAGTTAACATGGTTATATACTTGAAAGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAATAATATCTAATTGCAGTTAACATGGTTATATACTTGAAAGACC  250

seq1  CAAGTACTCAAACAGAAAATTCTTAGATTTGATAAACACATTAAACAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTACTCAAACAGAAAATTCTTAGATTTGATAAACACATTAAACAAAC  300

seq1  TGGCAAAGTCGACATAAAAGACTATGTAGCTTTGCTATGTAACAATAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAAGTCGACATAAAAGACTATGTAGCTTTGCTATGTAACAATAATA  350

seq1  AAGTTATTAATACAGGAGTTAATTGAAAAATTGACTTATGATTGCTTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATTAATACAGGAGTTAATTGAAAAATTGACTTATGATTGCTTTAC  400

seq1  AAAATATAATACTTAAAAATAAACTGAATTGCATTGGCCCACCCATCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATAATACTTAAAAATAAACTGAATTGCATTGGCCCACCCATCTTC  450

seq1  CCTGTACATTAAGACTTCTTGGACCCCCCCAGATGTCCTGACCAGTGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACATTAAGACTTCTTGGACCCCCCCAGATGTCCTGACCAGTGTGC  500

seq1  GATCCCCTGTAGATCTCCATTGTCCCACAATATCTGCACCTACCTTCATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCCTGTAGATCTCCATTGTCCCACAATATCTGCACCTACCTTCATC  550

seq1  AAACCTACTGATCAGGAAACATGCAACACCCATCTTACCTGCCTATTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTACTGATCAGGAAACATGCAACACCCATCTTACCTGCCTATTGAG  600

seq1  TCCACTGGGTACCCTCAAATACCCTGAGCAGC  632
      ||||||||||||||||||||||||||||||||
seq2  TCCACTGGGTACCCTCAAATACCCTGAGCAGC  632

seq1: chrX_47681268_47682276
seq2: B6Ng01-329F08.g_62_1068 (reverse)

seq1  TGTGTACATTGTTACAGATTTAGGTCATGGCATTAAGCCCTGTTACACTG  50
      |||||||| ||||||||| |||||||||||||||||||||||||||||||
seq2  TGTGTACA-TGTTACAGA-TTAGGTCATGGCATTAAGCCCTGTTACACTG  48

seq1  CTCATGATAGAGACTATT-AAAATATATCCACAACTCCAAACCCCATATT  99
      |||||||||||||||||| ||||||||||||||||||||||||||||| |
seq2  CTCATGATAGAGACTATTAAAAATATATCCACAACTCCAAACCCCATA-T  97

seq1  TTTTCCAAACTGCAGATTAATGTTGCTAAATAACATGTTGTAGTATCTAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAAACTGCAGATTAATGTTGCTAAATAACATGTTGTAGTATCTAG  147

seq1  TTAACTTTCCTCTGAGACCAAATTTTAAGCAGAAATGTACTTTTCATTTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTTCCTCTGAGACCAAATTTTAAGCAGAAATGTACTTTTCATTTG  197

seq1  AAACTTTGAGAGATAGACATTTCACTTAAGTGTGTAGGAATTTACTACTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTGAGAGATAGACATTTCACTTAAGTGTGTAGGAATTTACTACTT  247

seq1  AGTACAGGTCTCTAACATGTAATTAAATATAATTTCGATGTTCATTTTTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAGGTCTCTAACATGTAATTAAATATAATTTCGATGTTCATTTTTA  297

seq1  TAATGTTTCATGGTCTCATACCCTAAAACATAGAAATATTATAAAATTGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTTCATGGTCTCATACCCTAAAACATAGAAATATTATAAAATTGC  347

seq1  TTTTTGAGGATTTTAATTTTACTAATATTTCTTCTAGGTCACAAACATTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGGATTTTAATTTTACTAATATTTCTTCTAGGTCACAAACATTT  397

seq1  TGGCTCATATACAGTTCACAATCACATGCTTAGCTGCATCCTGGGTGAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCATATACAGTTCACAATCACATGCTTAGCTGCATCCTGGGTGAGA  447

seq1  CTTTGTATGTCATTGGCTCACTGAATTTATTATCTATCTGTATTGGATAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTATGTCATTGGCTCACTGAATTTATTATCTATCTGTATTGGATAC  497

seq1  TCTGAATTACATAAGTCTTATCAAATTCCTGAGAAATTAGCATATATTAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATTACATAAGTCTTATCAAATTCCTGAGAAATTAGCATATATTAG  547

seq1  CAGAAAGCAAATCATTTAAGACTAGTAGTGGATCAACTGACTGAGATACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGCAAATCATTTAAGACTAGTAGTGGATCAACTGACTGAGATACA  597

seq1  GGCATAAGATTAGAGAGTGATGGAAGTGCTCTGTATTTACTTCTGAAATC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAAGATTAGAGAGTGATGGAAGTGCTCTGTATTTACTTCTGAAATC  647

seq1  ATATTACATGGGAATACACAGTTTGTTCCCACTCATTGATCTGTTCACTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACATGGGAATACACAGTTTGTTCCCACTCATTGATCTGTTCACTT  697

seq1  TAACTTGGTACATTTTACTGAAAATTAAGACTTTAATAAAGTTCATTATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTGGTACATTTTACTGAAAATTAAGACTTTAATAAAGTTCATTATG  747

seq1  CTCTAAAGTAAAAAAAAATCCATAATGAGGGTCTATGTGTAGAAATCACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAGTAAAAAAAAATCCATAATGAGGGTCTATGTGTAGAAATCACT  797

seq1  GATAAAATATATTTTGTCAGAACATTGGCCCATGGTTGAGAACTTCTAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAATATATTTTGTCAGAACATTGGCCCATGGTTGAGAACTTCTAGA  847

seq1  TTCTTGATTCTCAGGTAAGCTTTCACTGTTGAGACACTGATGCTTCAAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGATTCTCAGGTAAGCTTTCACTGTTGAGACACTGATGCTTCAAAT  897

seq1  CATGCTCTTTTCCAAATAAATAAATAAATAAATAAATAAATAAATAAATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTCTTTTCCAAATAAATAAATAAATAAATAAATAAATAAATAAATA  947

seq1  AATAAATAAAATCTTCTATTGTGGTAAAGGGGTGGCAGTGGAGTAGACCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAAAATCTTCTATTGTGGTAAAGGGGTGGCAGTGGAGTAGACCT  997

seq1  TCATGAATTC  1009
      ||||||||||
seq2  TCATGAATTC  1007