BAC Information

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BAC

Clone NameB6Ng01-330I07
ChromosomeX (Build37)
Map Location 62,152,628 - 62,153,136
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666729, EG627470, 3830417A13Rik, Slitrk4
Downstream geneLOC100040011, Ctag2, LOC671840
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330I07.bB6Ng01-330I07.g
ACCGA117159GA117160
length1,160503
definitionB6Ng01-330I07.b B6Ng01-330I07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatatttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaaggagatgatcatgtggattttgtcttt
gagtttgtttatataatggattacattgatggattttcctatattaaact
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtattcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatattgtgaaaaagtttgtgcagaactgg
aattaaatcttctttgaaggtctgatagaactctgcactaaacctgtctg
gtcctgggctttttttggctgggagactattaacaactgcttctattttt
ttaggggatatgggactgtttagaaggtcaacttgatcctgattctactt
tggtacctggtatctgtccagaaatttgtccatttcttccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttattatgtctcccttttcagttctgattttgttaat
taggattttgtctctgtgccctctagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaactaactcctcctttggttaatttctttg
aatagttcttcttgtttccacttggttgatttcacccctgagtttgatta
tttcctgccgtttactcctcttgggtgaatttgctttctttttttctaga
gcttttagatgtgttgtcaagctgctagtatgtgctctctcccgtttctc
atggaggcactcagagctatgagtttcccccttagaaatgctttctttgt
gtcccaaagtttgggtacgttgtggcttcttttcattaaactctaaaagt
ctttcatttcttccttattcttccttgacagggatacattgaaaaggatg
tggttcaggtcagtggaatgttggccttccgtatattattttgcttatag
agcaatcgct

ctttggtgatgaacagcaacatggaagtgtaagccaaataaaccctttcc
tccccaacttgcttcttggtcatgatgtttgtgcaggaatagaaaccctg
actaagacagaggggatcagaacaaagttgaatattataatatttattcc
atgatttagttatgattatctgctattttatccttttcaagttttaacat
ctcttcctcttctttctgttcatataaataatatctaataatatagttgc
agacaactaattaatagtcccattgtttttttgttgttgttcctttagag
cataaaaaagcagaaaaatgttttctagctatataattactgaattaaat
aatttttaaaaataggcatgggaatctttgctctagtacctttattcatc
tattaacatttattatagccaaacaactccatccctatttgatctcctat
ttctcctccttgcttctgtagctaatgtggagatggtggttgtggtggtg
atg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_62152628_62153136
seq2: B6Ng01-330I07.g_69_577 (reverse)

seq1  CATCACCACCACAACCACCATCTCCACATTAGCTACAGAAGCAAGGAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCACCACAACCACCATCTCCACATTAGCTACAGAAGCAAGGAGGA  50

seq1  GAAATAGGAGATCAAATAGGGATGGAGTTGTTTGGCTATAATAAATGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGGAGATCAAATAGGGATGGAGTTGTTTGGCTATAATAAATGTTA  100

seq1  ATAGATGAATAAAGGTACTAGAGCAAAGATTCCCATGCCTATTTTTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGAATAAAGGTACTAGAGCAAAGATTCCCATGCCTATTTTTAAAA  150

seq1  ATTATTTAATTCAGTAATTATATAGCTAGAAAACATTTTTCTGCTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTAATTCAGTAATTATATAGCTAGAAAACATTTTTCTGCTTTTTT  200

seq1  ATGCTCTAAAGGAACAACAACAAAAAAACAATGGGACTATTAATTAGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCTAAAGGAACAACAACAAAAAAACAATGGGACTATTAATTAGTTG  250

seq1  TCTGCAACTATATTATTAGATATTATTTATATGAACAGAAAGAAGAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAACTATATTATTAGATATTATTTATATGAACAGAAAGAAGAGGAA  300

seq1  GAGATGTTAAAACTTGAAAAGGATAAAATAGCAGATAATCATAACTAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGTTAAAACTTGAAAAGGATAAAATAGCAGATAATCATAACTAAAT  350

seq1  CATGGAATAAATATTATAATATTCAACTTTGTTCTGATCCCCTCTGTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAATAAATATTATAATATTCAACTTTGTTCTGATCCCCTCTGTCTT  400

seq1  AGTCAGGGTTTCTATTCCTGCACAAACATCATGACCAAGAAGCAAGTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGGGTTTCTATTCCTGCACAAACATCATGACCAAGAAGCAAGTTGG  450

seq1  GGAGGAAAGGGTTTATTTGGCTTACACTTCCATGTTGCTGTTCATCACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAAGGGTTTATTTGGCTTACACTTCCATGTTGCTGTTCATCACCA  500

seq1  AAGGAATTC  509
      |||||||||
seq2  AAGGAATTC  509


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