BAC Information

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BAC

Clone NameB6Ng01-332L11
ChromosomeX (Build37)
Map Location 5,310,508 - 5,311,194
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC670673, LOC100042254, LOC100043934, LOC100042267, LOC100042275, LOC668967, LOC434724, LOC100043935, LOC668968, LOC546182, Mycs, LOC668969, LOC668970, OTTMUSG00000016453, LOC627412
Downstream geneLOC436185, LOC668971, LOC100043936, LOC668972, Nudt11, LOC208428, AU022751, Nudt10, Bmp15, Shroom4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332L11.bB6Ng01-332L11.g
ACCGA118736GA118737
length1,232691
definitionB6Ng01-332L11.b B6Ng01-332L11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagagcaagccattgctgtt
ctgttcaggaatttttcccctgtacccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtggggtcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
cctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaatcagtctggcggttc
ctcagaaaactggatatagtactaccggaggatccagcaatacctctcct
gggcatatatccagaagatgccccaactggtaagaaggacacatgctcca
ctatgttcatagcagccttatttataatagccagaagctggaaaggaacc
cagatgcccctcaacagaggaatggatacagaaaatgtggtacatctaca
caatggagtactactcagctattaaaagattgatttatgaaatttcctag
ccaaatggatggacctggagggcatcatcctgaggtgagtacacattcac
aaaggacctcacacatatgtactcactgatagtggaatatagcccaaaac
ctaagaataccagattataagaatacattccttaaaccattgaactcaga
aaatgaagactggaaagttgaacctatgccctctgaatgggacaatcaca
cccttgggaggagttttcagagatcacaggct
gaattctaaggatatgtccctctttttctgttacataaagggagaagaga
tgtgttaggtttgggaagtataaggctggggcccaaaggaggtcctactg
gaacctctgaaagggcttagtaaaaggtttgagaagaggttactgagtgg
ggcccaggttgctttatttaaggggcaggaaaggagggaaaaaggaagga
acccggaaatgtaaaatgccatctatttttatgaatgataaaatctcttt
agtagaggggactgctacagactgaattagttgttttctatctaaggtaa
tggctttgtgggttggagtaattgttagtcccaagtaggtgaatagaggg
gtggaaaattggaccttagaaggtgaccaagacctctatagccttggctg
gacaggaactttagaagaacagagctgatagtctggctaatttctagaga
gggactacagagaagaatatcatcaatgtagtgaataatcagagagagag
agagagagagagagagagagagagagagagagagagagagagagagagag
agagaagccaggacataaccaagtagatgtgggctatcctggaatcccct
gagggaaaacagttcaggtaaaggcaaaagatactttatgactggacata
ttagggggatagagaacaatgcatccttgaagatccaggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_5310508_5311194
seq2: B6Ng01-332L11.g_65_755

seq1  GAATTCTAAGGATATGTCCCTCTTTTTCTGTTACATAAAGGGAGAAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGGATATGTCCCTCTTTTTCTGTTACATAAAGGGAGAAGAGA  50

seq1  TGTGTTAGGTTTGGGAAGTATAAGGCTGGGGCCCAAAGGAGGTCCTACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTAGGTTTGGGAAGTATAAGGCTGGGGCCCAAAGGAGGTCCTACTG  100

seq1  GAACCTCTGAAAGGGCTTAGTAAAAGGTTTGAGAAGAGGTTACTGAGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTCTGAAAGGGCTTAGTAAAAGGTTTGAGAAGAGGTTACTGAGTGG  150

seq1  GGCCCAGGTTGCTTTATTTAAGGGGCAGGAAAGGAGGGAAAAAGGAAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAGGTTGCTTTATTTAAGGGGCAGGAAAGGAGGGAAAAAGGAAGGA  200

seq1  ACCCGGAAATGTAAAATGCCATCTATTTTTATGAATGATAAAATCTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGGAAATGTAAAATGCCATCTATTTTTATGAATGATAAAATCTCTTT  250

seq1  AGTAGAGGGGACTGCTACAGACTGAATTAGTTGTTTTCTATCTAAGGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGGGGACTGCTACAGACTGAATTAGTTGTTTTCTATCTAAGGTAA  300

seq1  TGGCTTTGTGGGTTGGAGTAATTGTTAGTCCCAAGTAGGTGAATAGAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTGTGGGTTGGAGTAATTGTTAGTCCCAAGTAGGTGAATAGAGGG  350

seq1  GTGGAAAATTGGACCTTAGAAGGTGACCAAGACCTCTATAGCCTTGGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAAATTGGACCTTAGAAGGTGACCAAGACCTCTATAGCCTTGGCTG  400

seq1  GACAGGAACTTTAGAAGAACAGAGCTGATAGTCTGGCTAATTTCTAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGAACTTTAGAAGAACAGAGCTGATAGTCTGGCTAATTTCTAGAGA  450

seq1  GGGACTACAGAGAAGAATATCATCAATGTAGTGAATAATCAGAGAGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTACAGAGAAGAATATCATCAATGTAGTGAATAATCAGAGAGAGAG  500

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  550

seq1  AGAGAAGCCAGGACATAACCAAGTAGATGTGGGCTATCCTGGAAT-CCCT  599
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGAGAAGCCAGGACATAACCAAGTAGATGTGGGCTATCCTGGAATCCCCT  600

seq1  GAGGGAAAACAGTTCAGGTAAAGGC-AAAGATACTTTATGACTGGACATA  648
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GAGGGAAAACAGTTCAGGTAAAGGCAAAAGATACTTTATGACTGGACATA  650

seq1  -TAGGGGGATAGAGAATAATGCATCCTTG-AGATCCAGGAC  687
       ||||||||||||||| |||||||||||| |||||||||||
seq2  TTAGGGGGATAGAGAACAATGCATCCTTGAAGATCCAGGAC  691