BAC Information

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BAC

Clone NameB6Ng01-333H15
ChromosomeX (Build37)
Map Location 105,921,259 - 105,922,427
singlet/doubletsinglet
Overlap genenone
Upstream gene2610002M06Rik, Gm732, Gm378, LOC668516, Gm379
Downstream geneBrwd3, 5730416F02Rik, Nsbp1, Sh3bgrl, EG622976, LOC100042831, LOC213474
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-333H15.bB6Ng01-333H15.g
ACCGA119268GA119269
length1,1621,236
definitionB6Ng01-333H15.b B6Ng01-333H15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctttgtctataaccagtttttgtcacagtaactggaaagtgaa
aacaaaagcaggggtcctcagggcatgatgggtcagaaacaaaagcagac
accaaggcaggacaaagaaaactgatgccaggcagaaatggtaggcatta
ttacctggtgttaagacacagaagaactgccaggcttatccacccacctg
ggtagactgatccttcttttatgctatcagttactgaaggcagcttgttt
agcatattgaaaacaaggatgctgaggcatagtgtcttctttattttttt
ctcaatggcttctgttgtagctctggggatggaccctagaaccttgtgtg
tttatacaacccttctaccactgaaccccaccaccagccccacagccagc
actcttagaattttcttccctgttccccaagagcttgaatagctatagaa
gtttgcaaggctcacagagagctttgcacaacgaataggaacaaagggaa
gtagaggaaaatgcacatgtgtagagcaggcttttgtcctaccattccag
aagtagtcacaaaggttctgaaaacaaaaacaaacaaacaaacaaacaaa
caaacaaacagctaaagctcctctgggattccagcacccaatattttgtg
ttctctttaaaatgaaaaatcaagtccaatttaaaataaaaaaatcaagt
tcaatttgtactgccaatgtaccctttaatgtgtggccttccactgaaat
gtgatcaccttactctccagaaaactaactctctctctctccttctttct
ctctttctctgtgtctctgtctctgtctctgactgtctgtctgtctgtct
gtctgtctgtctgtctccctctttctctctctccctcccatagtctttcc
aataatggagggcacaatctctcttcccatgctgagattatgtcaggctt
gagttttcacagttctctctcataatgtcacaatttgctattagtgctta
tgtgcagctgccttattgtatcaaaaactaaaaacaacaacaacaaacaa
acatttttgtttgtttgtttgttgttgttttttttttgctttttatgttt
atagtcatctatacctcaggctcttagaatctttttccttgctcctcttt
ccaatgaatcca

gaattctcacatgaggaatactgaatggctgaaaagcatctgaaaaagtg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccatgagat
tccacctcacatcagtcagaatggctaagatcaaaaattcaggtgaaagc
agatattggagaggttgtggctaaagaagaacactcctccattcttggtg
ggattgctagcttgcacaaccattctggaaatcagtctggcagtttctca
gaaaattggacatagtactaccagaggattccacaatacctctcttgggc
atatatccagatttatggaacaccaactggtaagaaggacacactccatt
atgttcataaccaccttatttataatagccagaagctggaaagaacccag
atgcccctcaacagaggaatggacacagtaaatgtggtacatttacacaa
tgttgtactactcagctaatacagagaatgaatttatgaaattcctagcc
aaatgaatggatctggagggcatcatcctgagtgaggtaactcaatcact
aaagaactcacgtgatatgtactaactgataagtggatattatcccagat
acttagaatacccaagatataagatataacttgaaaatcacatgaaactc
aagaagaatgaagaccaaagtgtggacactttgctccttcttagaactgg
gaacaaaacacccatggaaggacttacagagacaaagtttggaggtgaga
tggaaggatggaccatctaaagactgccatacccaggttccatcccataa
tcagcctccaaacgctaacaccatttcatacactgggaagattttgctgg
aagcaccctgatatagctgtctcttgtgaggctatgctggggcctagcaa
acacagaagtggattctcacattcagctattggatgtatcacagggcccc
aaaggagagctacagaaagtacccaagcagctaaagggatctgcaccctt
attattgtggaacaacaacatgaactatcagactacctcccggaactcgt
gttctctagctgcatatgtatcagaagatgtcccttattatggtccatct
acgggtgagaaagaagaggccccagttgtacaaaatttattatctccctc
agtactgggaattgccaggcctaatttggatgctgcctagagaagttgtt
ggcagcatgtactttcggtatctgtgcatcttcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_105921259_105922427
seq2: B6Ng01-333H15.b_48_1209 (reverse)

seq1  TGGA-TCATTGTGAAAGAGGAGCA--GAGAAAGATTCTAAGAGCCTGAGG  47
      |||| |||||| ||||||||||||  || |||||||||||||||||||||
seq2  TGGATTCATTG-GAAAGAGGAGCAAGGAAAAAGATTCTAAGAGCCTGAGG  49

seq1  TATTAGATGACTATAAAACATAAAAAGCAAAAAAAAAAACAAACAAACAA  97
      || ||||||||||| ||||||||||||| |||||||||||||   |||||
seq2  TA-TAGATGACTAT-AAACATAAAAAGC-AAAAAAAAAACAA--CAACAA  94

seq1  ACAAACAAACAAAAATGTTTGTTTGTTTGTTTGTTTGTTTTTAGTTTTTT  147
      ||||||||||||||||||||||||| |||||   ||||||||||  ||||
seq2  ACAAACAAACAAAAATGTTTGTTTG-TTGTT--GTTGTTTTTAG--TTTT  139

seq1  TGATACAATAAGGCAGCTGCACATAAGCACTAATAGC-AATTGTGACATT  196
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGATACAATAAGGCAGCTGCACATAAGCACTAATAGCAAATTGTGACATT  189

seq1  ATGAGAGAGAACTGTGAAAACTCAAGCCTGACATAATCTCAGCATGGGAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGAGAACTGTGAAAACTCAAGCCTGACATAATCTCAGCATGGGAA  239

seq1  GAGAGATTGTGCCCTCCATTATTGGAAAGACTATGGGAGGGAGAGAGAGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATTGTGCCCTCCATTATTGGAAAGACTATGGGAGGGAGAGAGAGA  289

seq1  AAGAGGGAGACAGACAGACAGACAGACAGACAGACAGACAGTCAGAGACA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGAGACAGACAGACAGACAGACAGACAGACAGACAGTCAGAGACA  339

seq1  GAGACAGAGACACAGAGAAAGAGAGAAAGAAGGAGAGAGAGAGAGTTAGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAGACACAGAGAAAGAGAGAAAGAAGGAGAGAGAGAGAGTTAGT  389

seq1  TTTCTGGAGAGTAAGGTGATCACATTTCAGTGGAAGGCCACACATTAAAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGAGAGTAAGGTGATCACATTTCAGTGGAAGGCCACACATTAAAG  439

seq1  GGTACATTGGCAGTACAAATTGAACTTGATTTTTTTATTTTAAATTGGAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACATTGGCAGTACAAATTGAACTTGATTTTTTTATTTTAAATTGGAC  489

seq1  TTGATTTTTCATTTTAAAGAGAACACAAAATATTGGGTGCTGGAATCCCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTTCATTTTAAAGAGAACACAAAATATTGGGTGCTGGAATCCCA  539

seq1  GAGGAGCTTTAGCTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGCTTTAGCTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGT  589

seq1  TTTCAGAACCTTTGTGACTACTTCTGGAATGGTAGGACAAAAGCCTGCTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGAACCTTTGTGACTACTTCTGGAATGGTAGGACAAAAGCCTGCTC  639

seq1  TACACATGTGCATTTTCCTCTACTTCCCTTTGTTCCTATTCGTTGTGCAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATGTGCATTTTCCTCTACTTCCCTTTGTTCCTATTCGTTGTGCAA  689

seq1  AGCTCTCTGTGAGCCTTGCAAACTTCTATAGCTATTCAAGCTCTTGGGGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCTGTGAGCCTTGCAAACTTCTATAGCTATTCAAGCTCTTGGGGA  739

seq1  ACAGGGAAGAAAATTCTAAGAGTGCTGGCTGTGGGGCTGGTGGTGGGGTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGAAGAAAATTCTAAGAGTGCTGGCTGTGGGGCTGGTGGTGGGGTT  789

seq1  CAGTGGTAGAAGGGTTGTATAAACACACAAGGTTCTAGGGTCCATCCCCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTAGAAGGGTTGTATAAACACACAAGGTTCTAGGGTCCATCCCCA  839

seq1  GAGCTACAACAGAAGCCATTGAGAAAAAAATAAAGAAGACACTATGCCTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTACAACAGAAGCCATTGAGAAAAAAATAAAGAAGACACTATGCCTC  889

seq1  AGCATCCTTGTTTTCAATATGCTAAACAAGCTGCCTTCAGTAACTGATAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCCTTGTTTTCAATATGCTAAACAAGCTGCCTTCAGTAACTGATAG  939

seq1  CATAAAAGAAGGATCAGTCTACCCAGGTGGGTGGATAAGCCTGGCAGTTC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAAGAAGGATCAGTCTACCCAGGTGGGTGGATAAGCCTGGCAGTTC  989

seq1  TTCTGTGTCTTAACACCAGGTAATAATGCCTACCATTTCTGCCTGGCATC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGTCTTAACACCAGGTAATAATGCCTACCATTTCTGCCTGGCATC  1039

seq1  AGTTTTCTTTGTCCTGCCTTGGTGTCTGCTTTTGTTTCTGACCCATCATG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCTTTGTCCTGCCTTGGTGTCTGCTTTTGTTTCTGACCCATCATG  1089

seq1  CCCTGAGGACCCCTGCTTTTGTTTTCACTTTCCAGTTACTGTGACAAAAA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGGACCCCTGCTTTTGTTTTCACTTTCCAGTTACTGTGACAAAAA  1139

seq1  CTGGTTATAGACAAAGAGAATTC  1169
      |||||||||||||||||||||||
seq2  CTGGTTATAGACAAAGAGAATTC  1162


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