MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-337M12
Chromosome	X (Build37)
Map Location	124,412,594 - 124,413,166
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Gm381, LOC100040472, Gm382, 4921511C20Rik, 4930412D23Rik
Downstream gene	LOC385523, LOC100040516, Mdm4-ps, EG237030, LOC100040538, LOC100040550
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gm381 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214308 MGI:2685227
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC100040472 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040472
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	Gm382 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211208 MGI:2685228
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4921511C20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245598 MGI:2685229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	4930412D23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73934 MGI:1921184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins

name	LOC385523 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:385523
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100040516 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040516
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Mdm4-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94054 MGI:2136991
definition	note : transformed mouse 3T3 cell double minute 4, pseudogene pseudo : _no_value

name	EG237030 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237030 MGI:3643896
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 26 Proteins pseudo : _no_value

name	LOC100040538 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040538
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100040550 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040550
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Gm381 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20985343 GeneID:214308 MGI:2685227
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : gene model 381, (NCBI) transcript_id : XM_142110.1

name	LOC100040472 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272250 GeneID:100040472
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : similar to pol protein transcript_id : XM_001474744.1

name	Gm382 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802851 GeneID:211208 MGI:2685228
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 382, (NCBI) transcript_id : NM_001033241.2

name	4930412D23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272242 GeneID:73934 MGI:1921184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins product : RIKEN cDNA 4930412D23 gene transcript_id : XM_001473476.1

name	LOC100040538 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272255 GeneID:100040538
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to attractin transcript_id : XM_001474881.1

name	Gm381 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20985344 GeneID:214308 MGI:2685227
definition	codon_start : 1 product : similar to novel gene coding for a KH domain containing protein protein_id : XP_142110.1

name	LOC100040472 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272251 GeneID:100040472
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001474794.1

name	Gm382 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701740 GeneID:211208 MGI:2685228
definition	GO_function : GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC211208 protein_id : NP_001028413.1

name	4930412D23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272243 GeneID:73934 MGI:1921184
definition	codon_start : 1 product : hypothetical protein LOC73934 protein_id : XP_001473526.1

name	LOC100040538 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272256 GeneID:100040538
definition	codon_start : 1 product : similar to attractin protein_id : XP_001474931.1

name	LOC385523 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:385523
definition	number : 3 pseudo : _no_value

name	LOC385523 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:385523
definition	number : 2 pseudo : _no_value

name	LOC385523 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:385523
definition	number : 1 pseudo : _no_value

name	LOC100040516 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040516
definition	number : 2 pseudo : _no_value

name	LOC100040516 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040516
definition	number : 1 pseudo : _no_value

name	EG237030 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:237030
definition	number : 1 pseudo : _no_value

name	LOC100040550 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040550
definition	number : 2 pseudo : _no_value

name	4921511C20Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149272234 GeneID:245598 MGI:2685229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4921511C20 gene pseudo : _no_value transcript_id : XR_035167.1

clone name	MSMg01-118B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057K08
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-337M12.b	B6Ng01-337M12.g
ACC	GA122298	GA122299
length	1,139	567
definition	B6Ng01-337M12.b	B6Ng01-337M12.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctgcactaaatccatctggtcctgggctttttttggttgggaggt ttttaatgatttttctattaccttgtgtgatatgggcctgtatagtttac ctgctcttgatttaacgttggtatgtggcatctgtctggaaaaccatcca tttcatttagattttatagttttgttgtgtatatgcttttatagtaggat ctgataactttttgaatttccttcatttctgttgttatgtctcccttttc atttctgatcttttaatttggatactgctttttggccctttcattagttt ggccaggggtttatctatcatgttgatttgttcaaacaaccagctattgc ttttgttgattctttgaattgttctttgtttctattgggttgatttttgc cctgactttgactatgtcctgccttctactcatcttgtgtgtgtttgctt ctttttgttatagggcccacaggtgtgctgttaagttgttagtgtatgat ctctccagtttctttaccagggcacttagtgctgtgacctttcttcttag gactgctttcactgtgtcccatacatttgggtatgaggtgtcaacatttt aattaaattccaagaagttttgatttctttctttatttctttcatgacca agttatcactgagtagagagttgttcagtttccatgtgtatgtgggattt ccatagtttttgctgttattgaagaccagccttaggtcatggtgatctca taagatgcataatattattttgatctgcttgtatctgttgagggttgttt tgtgaccagttatatggttgatgttggagaaggtaccatcagttgctgag aagaaggtttattcttttgttttagggtgaaatgttctggagttatctgt taaatccatttgggttcacaacttctctcagtttcactgtgtctctgtct agtttctggatcaatgacttgtacattggtgagagtgtgtatagaaatcc cccactcttatgtgtagactcatgtgtgttttgagccttagaaaagtctc tttatgagttcgctggctctgcattgagccatgatgtattattgagactt ctctggtgaattcacttgagttaatgaaatgtctctgct	accctacaaataaacaagcaaaacatttcatttaattttattcaatatct tgagaaggtgcattctgggtattattctggtagttttctaaatcaatgaa gtagtagccatcagtgtccaattagtaacacaaaatcagttataaaattt aaataattctcaatatattcatcaccaggtaaatgctcttttaataaaac aatatacttactgcaatattttgagccttagatatttaaaatcaaccaga ttttttttaacattttcaatggagagagtgagttatgatggccatttcct ctcttttgtcagttggcaatgctcagataggcagtagtcattttagtttg tatgtgaagccaagagaagctgttaacagtgtttttcacttcatattttt taacatattctttcttcttttttaatagtcagtgccctcaacctatgtgg tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatctgtctgtctctgtc tctgtcgctgtcttggcatgtatgtattacctcatgagtgaaaacttctc tcagcaatccagctgcc
quality values	Open. Hide. 58 26 27 35 58 41 36 31 54 46 45 54 54 62 62 62 62 38 18 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 49 62 62 62 59 62 62 59 62 62 62 62 62 59 62 62 62 62 43 59 62 49 62 62 62 59 62 62 59 62 62 62 62 62 59 59 62 62 62 59 62 62 59 62 62 62 62 49 49 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 49 58 54 54 54 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 45 45 58 58 58 58 58 58 58 58 58 54 58 34 58 54 49 58 58 58 58 58 58 54 52 54 58 58 54 58 58 58 58 46 46 54 58 58 51 58 58 58 58 58 58 51 51 46 58 58 42 51 53 58 51 51 50 58 58 50 51 58 58 49 58 54 51 49 50 58 50 49 58 52 47 50 58 54 58 58 50 58 58 58 58 50 49 53 58 51 52 50 58 58 51 52 58 58 51 50 58 51 52 51 58 51 51 34 51 58 47 41 47 34 58 52 58 58 53 51 52 52 54 51 58 51 28 53 53 40 58 41 51 52 51 58 58 50 54 53 43 50 58 58 41 39 51 37 53 58 49 51 53 45 47 54 52 54 46 39 40 25 54 50 38 50 30 50 49 37 53 54 54 54 50 35 35 49 51 42 42 39 53 51 50 53 53 31 42 27 45 34 34 54 51 46 46 32 13 54 33 42 37 40 54 42 30 42 35 37 45 53 41 32 53 53 53 34 46 30 40 38 37 45 32 53 34 53 32 32 52 41 49 49 51 45 32 31 42 40 53 40 31 34 51 31 31 42 45 41 47 31 39 32 41 23 47 41 31 39 51 33 46 51 45 51 37 31 31 17 31 29 30 31 38 37 43 42 31 32 51 22 33 30 31 26 45 31 31 31 33 31 18 42 33 27 46 25 21 21 31 26 36 33 36 16 28 23 31 31 31 31 38 10 32 32 26 28 34 20 36 23 46 29 32 37 17 11 35 46 46 26 36 26 46 46 30 6 8 32 27 25 31 29 46 24 19 37 19 30 19 20 31 22 32 12 29 24 33 25 33 33 44 13 30 25 48 37 31 13 25 17 38 48 37 18 44 15 26 16 26 25 32 26 16 32 34 37 34 32 28 34 21 31 22 33 43 30 32 31 32 31 24 11 30 24 32 25 19 23 21 15 21 27 21 19 21 48 26 7 11 17 11 28 28 15 13 22 32 34 27 20 20 19 25 4 3 5 16 21 18 20 10 5 11 25 10 26 9 4 3 3 3 5 7 18 21 11 22 29 7 15 24 32 27 28 14 12 9 27 28 9 13 15 28 14 14 20 16 7 8 6 9 26 10 13 5 20 7 20 9 24 21 27 26 15 20 21 10 16 8 24 9 12 16 18 21 25 23 12 7 8 5 12 17 29 4 5 10 14 3 3 7 14 1 9 6 13 8 6 15 5 7 5 4 8 6 21 17 14 4 13 4 5 5 1 2 11 4 7 7 2 3 9 9 2 5 7 4 6 11 4 17 15 4 2 3 1 6 2 3 3 5 6 17 8 3 3 8 15 11 22 14 13 4 3 9 7 4 6 8 3 1 2 5 4 18 4 4 2 1 1 4	Open. Hide. 31 54 62 62 44 56 54 56 38 49 56 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 49 35 59 62 62 37 49 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 54 52 40 41 30 32 17 14 15 16 11 31 17 29 20 22 23 21 19 13 10 22 7 13 21 32 16 25 10 12 10 9 11 17 9 37 34 25 47 13 9 21 30 34 17 13 27 35 6 9 19 13 9 9 9 4 6 6 13 23 25 18 22 30 40 16 27 16 10 16 10 16 12 11 9 16 19 9 6 10 7 10 9 10 13 12 9 13 23 6 10

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_124412594_124413166
seq2: B6Ng01-337M12.g_65_637 (reverse)

seq1  GGCAGCTGG-CTGCTGAGAGAAGTTTTCACTCATGTAGGTAATACATACA  49
      |||||||||  |||||||||||||||||||||||| ||||||||||||||
seq2  GGCAGCTGGATTGCTGAGAGAAGTTTTCACTCATG-AGGTAATACATACA  49

seq1  TGCCAAGACAGAGACAGAGACAGAGACAGACAGATACACACACACACACA  99
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGACAGCGACAGAGACAGAGACAGACAGATACACACACACACACA  99

seq1  CACACACACACACACACACCACATAGGTTGAGGGCACTGACTATTAAAAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACCACATAGGTTGAGGGCACTGACTATTAAAAA  149

seq1  AGAAGAAAGAATATGTTAAAAAATATGAAGTGAAAAACACTGTTAACAGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAGAATATGTTAAAAAATATGAAGTGAAAAACACTGTTAACAGC  199

seq1  TTCTCTTGGCTTCACATACAAACTAAAATGACTACTGCCTATCTGAGCAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTGGCTTCACATACAAACTAAAATGACTACTGCCTATCTGAGCAT  249

seq1  TGCCAACTGACAAAAGAGAGGAAATGGCCATCATAACTCACTCTCTCCAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAACTGACAAAAGAGAGGAAATGGCCATCATAACTCACTCTCTCCAT  299

seq1  TGAAAATGTTAAAAAAAATCTGGTTGATTTTAAATATCTAAGGCTCAAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATGTTAAAAAAAATCTGGTTGATTTTAAATATCTAAGGCTCAAAA  349

seq1  TATTGCAGTAAGTATATTGTTTTATTAAAAGAGCATTTACCTGGTGATGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCAGTAAGTATATTGTTTTATTAAAAGAGCATTTACCTGGTGATGA  399

seq1  ATATATTGAGAATTATTTAAATTTTATAACTGATTTTGTGTTACTAATTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTGAGAATTATTTAAATTTTATAACTGATTTTGTGTTACTAATTG  449

seq1  GACACTGATGGCTACTACTTCATTGATTTAGAAAACTACCAGAATAATAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGATGGCTACTACTTCATTGATTTAGAAAACTACCAGAATAATAC  499

seq1  CCAGAATGCACCTTCTCAAGATATTGAATAAAATTAAATGAAATGTTTTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAATGCACCTTCTCAAGATATTGAATAAAATTAAATGAAATGTTTTG  549

seq1  CTTGTTTATTTGTAGGGTGAATTC  573
      ||||||||||||||||||||||||
seq2  CTTGTTTATTTGTAGGGTGAATTC  573

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BAC

BAC End Information

Alignment Information