MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-339K11
Chromosome	X (Build37)
Map Location	23,566,201 - 23,567,165
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Klhl13, EG635719, Wdr44, EG236749, EG214450, EG245376
Downstream gene	LOC546271, LOC100043957, LOC100043206, LOC669000, LOC629204, EG546272, LOC100043216, EG546282, LOC100040417, LOC100040428
Link	Open Mouse BAC browser

Click to get alignment info.

name	Klhl13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67455 MGI:1914705
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG635719 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:635719 MGI:3646195
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Wdr44 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72404 MGI:1919654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG236749 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:236749 MGI:3648288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG214450 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214450 MGI:3648623
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	EG245376 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245376 MGI:3648554
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC546271 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546271
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 44 ESTs

name	LOC100043957 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043957
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	LOC100043206 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043206
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	LOC669000 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:669000
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC629204 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629204
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 5 Proteins pseudo : _no_value

name	EG546272 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546272 MGI:3643862
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 11 ESTs, 5 Proteins

name	LOC100043216 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043216
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 7 ESTs, 5 Proteins

name	EG546282 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546282 MGI:3646322
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040417 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040417
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs, 5 Proteins pseudo : _no_value

name	LOC100040428 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040428
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 66 ESTs

name	Klhl13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802641 GeneID:67455 MGI:1914705
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kelch-like 13 (Drosophila) transcript_id : NM_026167.2

name	Wdr44 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249072 GeneID:72404 MGI:1919654
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat domain 44 transcript_id : NM_175180.2

name	EG236749 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362382 GeneID:236749 MGI:3648288
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG236749 transcript_id : NM_001034864.2

name	EG245376 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126157496 GeneID:245376 MGI:3648554
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG245376 transcript_id : NM_001081666.1

name	LOC546271 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271011 GeneID:546271
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 44 ESTs product : similar to LOC635138 protein transcript_id : XM_001478408.1

name	LOC100043957 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271064 GeneID:100043957
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : similar to XMR transcript_id : XM_001481261.1

name	LOC100043206 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271013 GeneID:100043206
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100043206 transcript_id : XM_001478415.1

name	EG546272 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406980 GeneID:546272 MGI:3643862
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 11 ESTs, 5 Proteins product : predicted gene, EG546272, transcript variant 2 transcript_id : XM_620960.3

name	EG546272 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271016 GeneID:546272 MGI:3643862
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 5 Proteins product : predicted gene, EG546272, transcript variant 1 transcript_id : XM_001478430.1

name	LOC100043216 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271020 GeneID:100043216
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 6 ESTs, 5 Proteins product : hypothetical protein LOC100043216, transcript variant 2 transcript_id : XM_001478456.1

name	LOC100043216 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271018 GeneID:100043216
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 5 Proteins product : hypothetical protein LOC100043216, transcript variant 1 transcript_id : XM_001478447.1

name	EG546282 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126090645 GeneID:546282 MGI:3646322
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG546282 transcript_id : NM_001081657.1

name	LOC100040428 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271221 GeneID:100040428
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 66 ESTs product : hypothetical protein LOC100040428 transcript_id : XM_001474898.1

name	Klhl13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385674 GeneID:67455 MGI:1914705
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 note : BTB and kelch domain containing 2 product : kelch-like 13 protein_id : NP_080443.1

name	Wdr44 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249073 GeneID:72404 MGI:1919654
definition	codon_start : 1 product : WD repeat domain 44 protein_id : NP_780389.2

name	EG236749 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702205 GeneID:236749 MGI:3648288
definition	codon_start : 1 exception : mismatches in translation note : novel protein similar to testis derived transcript (Tes) product : similar to hypothetical protein protein_id : NP_001030036.1

name	EG245376 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126157497 GeneID:245376 MGI:3648554
definition	GO_function : GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC245376 protein_id : NP_001075135.1

name	LOC546271 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271012 GeneID:546271
definition	codon_start : 1 product : similar to LOC635138 protein protein_id : XP_001478458.1

name	LOC100043957 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271065 GeneID:100043957
definition	codon_start : 1 product : similar to XMR protein_id : XP_001481311.1

name	LOC100043206 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271014 GeneID:100043206
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478465.1

name	EG546272 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271017 GeneID:546272 MGI:3643862
definition	codon_start : 1 product : similar to XMR isoform 1 protein_id : XP_001478480.1

name	EG546272 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83000007 GeneID:546272 MGI:3643862
definition	codon_start : 1 product : similar to XMR isoform 2 protein_id : XP_620960.2

name	LOC100043216 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271019 GeneID:100043216
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001478497.1

name	LOC100043216 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271021 GeneID:100043216
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001478506.1

name	EG546282 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126090646 GeneID:546282 MGI:3646322
definition	codon_start : 1 note : novel protein similar to Xlr-related, meiosis regulated (Xmr) product : hypothetical protein LOC546282 protein_id : NP_001075126.1

name	LOC100040428 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271222 GeneID:100040428
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474948.1

name	EG635719 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:635719
definition	number : 1 pseudo : _no_value

name	EG214450 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:214450
definition	number : 1 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 1 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 2 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 3 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 4 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 5 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 6 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 7 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 8 pseudo : _no_value

name	LOC629204 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271015 GeneID:629204
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 5 Proteins product : hypothetical LOC629204 pseudo : _no_value transcript_id : XR_035701.1

name	LOC100040417 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271220 GeneID:100040417
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs, 5 Proteins product : similar to XMR pseudo : _no_value transcript_id : XR_031969.1

clone name	MSMg01-502F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335L15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-536M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142N05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-167D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352C24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-385A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304I16
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-285L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099I23
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-339K11.b	B6Ng01-339K11.g
ACC	GA123590	GA123591
length	921	1,161
definition	B6Ng01-339K11.b	B6Ng01-339K11.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcagagttctcttctcattcttactccatcttcctttgtttcttca ttcattattttctttcttttttctctctctctccctccctctctttcttt cttccttcctttctttcttccttccttccttccttccttccttcctttct ttctttctttctttctttctttcttccttccttccttcctttctttcttt ctttctttctttctttctttctttctttctttcttccttccttccttctg tcctcctttcctatcttcctccttctgtccctatttctctctctctcttt ctttcattatgagggggttattaaaatgtatttctaatcaatacagtctg aggggtaagctcatgtgtttcatagtgggatggaagatctgagtcagcca tgaagagatagagaatcccctatgtgttcctggtcacagggtttcagtca tgagtatgcattagcagagcatgagtgttagaatacaaacttggaacaca gggtcacttctacatcttgcctcatcagaggcatgattcttagtcctcca gcgacataataagactaattatctattcagtcattacattagagtaacac actctcttgcataccattaagtaataggctactatggttagaagaaataa ttctatggatctcttcagaatatattcaaccaggttgtcaggttcttgca gttgtgggttagtttattacggaggcataagtaagacttgatggaggtat tagctggaggcagcagcaactgttctggttctagatgatatgtctgcatc ctactgtgactcagaatctatgcacattgatttttaagactgaattgtgg ctcttgatcagagagctgatactgctatcatcatatatctcagatcttca gacatgagtatgtgtgtctga	gaattctttgtttagctctgagccccattttttaatggggttatttgaat ttctggagtccagcttcttgagatctttctatatattggatattagttcc ctatcaaatttagcattggtataaatcctttcccaatttgttggtgacct ttttgtcttattgacagtttcttttgttttacagaaacttttccatttca tgaggtcccatttattgattctcaattaaacagcacaaaaacatcattgc tgttaggttaaggaatttttccactgtgcatacatcttcgaggcttttcc tcactttcttctctataagttttagtgtgtctggttttatgtggagttcc ttgatccacttagacttgagcttactacaatgagataagactggaacatt tcaccttcttctacatgataacaactagttaagccagcaccatttgttgg aaatgctgtcttttttccattgcatggttttagctcatttgtgaaatatc aagtgaccataggtgtgtggggttatttctgggacttcagttctattgca ttgatctacctgtctgtcactgtaccagtaccatgcagtttttatcacag ttgctctgtagtacaacttgaggtcatgaatggtgattccaccagaggtt cttttattgttgagaatagttttgctatcctggggtttttgttatttcag atgagtttgcaaattgccatctaattcagtgaagaactgagttggaattt tgatggggatttcattgaatctgtagattgctttcagcaagatagccatt tttacaatattaatcctgccaatccatgagcatgggagatctttccatcc tctgagatcttttgattttcttttttttcagagactagaagttcttatca tacagatctttcacttcctttagtttagggtcatccccaaggtatttgat attggtttggtgacttatttcaaggctgtaattcctaatttctttcttca gctgttatccttgtgtagaggaaaggtcacagattgtttggagttattta taatcagcctactgcctgagctgttttttcaggttagagatctctgagga tatacgtatatataataatcgattcttctgccaagatgaggaaatgttga acatcctttac
quality values	Open. Hide. 62 59 24 36 62 36 21 62 62 62 62 62 62 62 62 62 62 62 62 44 43 62 62 62 62 62 62 62 62 62 59 32 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 59 44 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 49 49 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 49 41 41 49 58 58 58 58 49 58 58 58 49 54 54 54 49 49 54 54 49 49 54 54 49 54 54 54 49 49 54 54 54 54 54 54 54 49 49 49 49 54 54 49 49 54 54 54 54 54 54 49 49 49 49 49 49 49 49 49 49 49 49 49 49 49 49 49 49 51 52 51 46 46 46 46 46 46 46 51 51 46 46 46 46 46 46 46 46 46 46 33 46 46 46 46 46 46 46 46 46 46 46 46 46 48 48 46 48 48 48 46 46 46 46 46 46 46 46 46 46 46 46 46 46 46 46 32 46 46 19 32 32 32 32 46 46 46 46 46 46 46 44 25 16 29 41 29 25 31 25 23 9 16 25 25 19 29 29 29 31 29 22 29 41 41 28 23 22 22 19 28 19 25 29 32 29 29 33 39 30 29 43 43 43 43 32 43 43 43 43 43 32 43 32 25 29 29 28 29 25 16 29 29 24 25 43 43 43 31 31 43 43 48 43 43 24 30 30 25 25 27 24 27 25 22 25 32 24 27 27 24 17 24 23 14 14 23 24 34 34 27 30 34 32 23 23 27 27 24 34 27 30 32 30 34 25 19 13 16 22 23 30 27 30 24 34 34 32 27 25 27 27 30 25 27 27 27 23 24 27 26 24 24 21 15 15 24 24 24 18 15 9 16 28 24 15 21 11 3 7 11 15 22 15 9 9 14 19 8 22 24 17 13 24 27 24 27 22 13 3 12 24 24 21 13 13 15 15 18 15 20 21 24 23 13 16 11 9 13 20 20 23 24 21 9 5 3 3 16 21 24 15 18 14 13 23 15 15 27 19 15 13 9 15 22 15 21 21 3 1 3 3 13 24 22 24 21 21 25 23 15 13 11 3 3 3 11 3 3 2 3 16 22 21 12 3 3 5 14 20 15 20 15 20 20 13 13 18 23 24 22 20 20 21 23 23 21 23 12 15 16 18 17 23 13 7 16 16 21 20 15 13 15 23 21 22 21 23 18 21 21 22 21 13 14 13 13 18 13 14 21 21 18 18 21 21 16 23 24 20 16 20 15 15 16 19 22 20 21 21 15 20 18 21 23 12 18 22 20 15 11 15 20 21 8 15 7 13 18 18 16 20 21 22 15 18 18 23 11 18 17 18 12 17 17 20 10 5 3 1 1 3 3 3 8 9 13 13 21 19 18 20 20 17 13 18 19 18 13 24 24 18 2 3 3 2 3 8 21 16 8 18 11 7 20 9 14 8 13 9 12 12 13 5 12 15 20 15 16 24 18 15 5 20 12 15 20 18 13 15 21 22 17 17 15 7 21 15 14 12 22 22 12 22 14 15 8 18 18 13 15 13 19 17 15 5 13 6 11 11 9 4 2 3 7 8 9 11 22 18 13 8 19 18 9 16 7 3 4 10 19 18 19 9 8 9 9 15 4 8 9 15 3 5 3 9 13 13 5 6 5 5 8 17 13 17 13 17 17 14 14 14 17 12 6 19 8 17 13 13 5 18 19 13 8 11 3 3 3 5 8 7 10 3 5 15 8 11 14 15 22 13 3 4 8 12 4 3 6 12 8 3 12 11 7 6 15 7 12 12 13 14 15 10 21 16 14 11 7 13 8 11 9 17 17 6 6 7 19 8 8 13 5 3 5 2 8 13 11 12 21 10 11 11 5 9 10 21	Open. Hide. 62 47 31 37 62 62 62 62 62 62 56 56 25 31 30 43 62 62 62 62 47 47 62 62 62 62 49 49 62 62 62 62 44 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 59 59 59 62 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 59 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 54 54 62 62 62 62 62 62 58 58 58 49 49 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 54 45 58 54 58 58 58 58 58 58 58 58 54 58 58 58 58 48 58 52 54 58 58 58 58 58 58 58 54 54 58 58 58 52 54 58 58 58 54 54 58 58 58 54 50 51 58 58 45 46 58 54 58 51 58 58 58 58 58 58 58 50 51 50 46 58 58 53 41 54 58 47 50 51 50 58 43 51 58 58 58 58 54 54 58 58 58 58 54 51 53 49 51 53 53 52 54 58 48 50 53 58 58 53 58 46 52 53 53 54 46 58 58 58 58 39 39 58 52 53 52 51 58 58 49 49 58 51 50 58 39 26 44 42 46 50 44 49 41 40 36 17 49 43 51 52 49 58 58 42 50 39 51 58 31 49 33 51 29 51 47 42 54 37 41 54 38 38 44 44 41 39 52 52 50 41 51 54 54 51 32 54 54 54 54 51 37 39 39 39 49 46 39 40 24 51 32 52 54 29 49 54 53 39 40 30 22 20 29 42 46 34 42 26 40 53 37 31 45 40 53 33 26 33 42 53 42 53 29 53 33 32 52 41 46 18 38 29 45 36 36 41 31 53 53 53 31 42 26 33 49 49 47 33 14 51 45 33 34 41 38 53 42 37 31 31 30 51 29 31 23 37 15 40 51 33 32 51 31 38 28 31 36 29 32 43 29 23 42 30 40 29 32 36 51 48 46 31 28 32 29 22 30 31 31 31 31 27 30 15 42 31 42 28 40 18 29 33 30 25 25 31 43 46 13 27 29 34 32 47 37 39 23 31 13 27 32 48 36 19 37 30 30 29 32 26 26 27 31 31 17 37 31 36 10 46 46 23 25 27 24 47 46 8 10 27 48 44 44 43 43 43 27 18 21 18 32 13 24 17 29 29 11 24 22 22 25 20 21 10 32 30 29 31 26 31 31 32 33 21 31 24 24 23 37 30 16 23 19 26 15 19 34 13 39 13 30 22 16 32 11 21 30 47 19 4 9 19 5 17 36 33 19 8 8 26 24 6 22 20 47 6 9 28 24 27 24 21 16 14 20 48 21 9 5 6 24 28 16 15 7 7 20 34 24 27 19 17 12 20 18 27 6 3 5 19 16 8 27 24 7 17 6 24 29 16 14 17 34 10 4 7 8 10 27 7 21 16 17 15 7 10 13 11 11 15 15 27 24 22 8 11 7 14 4 10 12 30 20 13 10 5 11 7 5 4 5 19 13 10 18 8 28 22 6 7 12 5 15 13 10 3 20 17 6 5 4 5 6 11 6 16 6 6 9 4 23 5 9 4 4 8 7 10 5 13 7 17 8 9 17 28 19 12 17 10 13 17 8 11 7 2 2 1 11 6 4 4 5 4 6 11 10 3 3 5 1 4 6 3 5 3 2 5 2 2 6 4 6 5 14 9 19 5 2 1 5 4 12 13 8 6 8 5 11 7 4 15 16 3 6 5 4 1 2 2 5 4 8 11 4 19 9 5 3 4 2 1 3 4 4 11 28 4 1 3

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_23566201_23567165
seq2: B6Ng01-339K11.b_42_962 (reverse)

seq1  TCAGAACACACATACCCTCAATGTCTGAAAGATCCTGAGATATATGATTG  50
      |||| |||||||||| |   ||||||| ||||| ||||||||||||| ||
seq2  TCAG-ACACACATACTC---ATGTCTG-AAGAT-CTGAGATATATGA-TG  43

seq1  ATAAGCCAAGTAATTCAGGCCTCCTCTGGATCCAAAGAAGGCCACAAATT  100
      || |||  ||||  ||||  || |||| ||||  ||||  ||||| ||||
seq2  AT-AGC--AGTA--TCAG--CT-CTCT-GATC--AAGA--GCCAC-AATT  79

seq1  CAGTTCTTTAAAAATCAATGTGCAATAGAATTTCTGAAGTCACAGTAGGG  150
      ||||   |||||||||||||||| |||||  ||||| |||||||||| ||
seq2  CAGT--CTTAAAAATCAATGTGC-ATAGA--TTCTG-AGTCACAGTA-GG  122

seq1  ATGCAGACATATCCTTCTAGAACCAGAACAGTTGCTGCTGCCTCCAGCTA  200
      |||||||||||| | |||||||||||||||||||||||||||||||||||
seq2  ATGCAGACATAT-CATCTAGAACCAGAACAGTTGCTGCTGCCTCCAGCTA  171

seq1  ATACCTCCATCAAGTCTTACTTATGCCTCCGTAAAAATAAACTAACCCAC  250
      ||||||||||||||||||||||||||||||||   |||||||||||||||
seq2  ATACCTCCATCAAGTCTTACTTATGCCTCCGT---AATAAACTAACCCAC  218

seq1  AACTGCAAGGGGCCTGACAACCTGGTTGAATATATTCTGAAGAGATCCAT  300
      |||||||| |  ||||||||||||||||||||||||||||||||||||||
seq2  AACTGCAA-GAACCTGACAACCTGGTTGAATATATTCTGAAGAGATCCAT  267

seq1  AGAATTATTTCTTCTAACCATAGTAGCCTATTACTTAATGGTATGCAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||  ||
seq2  AGAATTATTTCTTCTAACCATAGTAGCCTATTACTTAATGGTATGC--AA  315

seq1  GAGAGTGTGTTACTCTAATGTAATGACTTTGAATAAAAATAATTTAGTCT  400
      |||||||||||||||||||||||||||  |||||  | |||| |||||||
seq2  GAGAGTGTGTTACTCTAATGTAATGAC--TGAAT--AGATAA-TTAGTCT  360

seq1  TATTATGTTTGCTGGAGGACTAAGAATCATGCCTTTCTGATGAGGCAAGA  450
      ||||||| | |||||||||||||||||||||||  |||||||||||||||
seq2  TATTATG-TCGCTGGAGGACTAAGAATCATGCC--TCTGATGAGGCAAGA  407

seq1  TGTAGAAGTGACCCTGTGTTCCAAGTTTGTATTTCTAACACTCATGCTCT  500
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGTAGAAGTGACCCTGTGTTCCAAGTTTGTA-TTCTAACACTCATGCTCT  456

seq1  GCTAATGCATACTCATGACTGAAACCCTGTGACCAGGAACACATAGGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATGCATACTCATGACTGAAACCCTGTGACCAGGAACACATAGGGGA  506

seq1  TTCTCTATCTCTTCATGGCTGACTCAGATCTTCCATCCCACTATGAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTATCTCTTCATGGCTGACTCAGATCTTCCATCCCACTATGAAACA  556

seq1  CATGAGCTTACCCCTCAGACTGTATTGATTAGAAATACATTTTAATAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGCTTACCCCTCAGACTGTATTGATTAGAAATACATTTTAATAACC  606

seq1  CCCTCATAATGAAAGAAAGAGAGAGAGAGAAATAGGGACAGAAGGAGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCATAATGAAAGAAAGAGAGAGAGAGAAATAGGGACAGAAGGAGGAA  656

seq1  GATAGGAAAGGAGGACAGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGAAAGGAGGACAGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGA  706

seq1  AAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGAAAGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGAAAGAAA  756

seq1  GAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGA  806

seq1  AAGAAAGGAAGGAAGAAAGAAAGAGAGGGAGGGAGAGAGAGAGAAAAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGGAAGGAAGAAAGAAAGAGAGGGAGGGAGAGAGAGAGAAAAAAG  856

seq1  AAAGAAAATAATGAATGAAGAAACAAAGGAAGATGGAGTAAGAATGAGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAATAATGAATGAAGAAACAAAGGAAGATGGAGTAAGAATGAGAA  906

seq1  GAGAACTCTGAATTC  965
      |||||||||||||||
seq2  GAGAACTCTGAATTC  921

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information