BAC Information

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BAC

Clone NameB6Ng01-340O13
ChromosomeX (Build37)
Map Location 106,829,129 - 106,830,335
singlet/doubletsinglet
Overlap genenone
Upstream geneGm379, Brwd3, 5730416F02Rik, Nsbp1, Sh3bgrl, EG622976, LOC100042831, LOC213474
Downstream geneLOC245573, EG634340, LOC668530
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-340O13.bB6Ng01-340O13.g
ACCGA124457GA124458
length1,2131,225
definitionB6Ng01-340O13.b B6Ng01-340O13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgtttagcactgtaatctatttttaatagggttatttcattt
tctggagtccatcttcttgatttctttacatatattggatattagtcccc
tatctgatttaggattggtaaagatcctttcccaatttgttggtggcctt
ttttttttccttatgttgggatcatttgtttctgctgatttctacaagca
acatatttggccttattccaaattctagagttcagtttttaagctggttc
tttattttatctgctatgcatcacccatccataagtgtctctctggctcc
tagagcattctattcccctgcttcttcttacccctctacccccctcctcc
cagataaggcatctgactaggcacttggatctcttggctctggcctgtta
catctgtttgggtatctttactaaggaaactgactcccattccccctgct
ctcccatctttctctaatggataaatgtcaccctgagctgcgtgctttgc
ctaatattactatgaaagccacactggtgtaccagaaaactcctctcacc
ctccttgggataaattcatattgaaaggggacacctctcctctgtgatgt
ggaatatttttctctttgaaaagtttcttattctactttgagatgttctg
aatggaaattcttgtcatgaggacaggttttccaccttatctactttctc
tcacttcctcctaggagcctgtagtctagtaattaccctgtctatcccca
cctattgtgctgcttcttctggtctcagctctcacctaaagattcctctc
cctactaggagctgattgctctgtctcttcaataagtgcccctagcgctt
tcctccctcttggagcttatagaaatttcttccagtatattttcattttt
gaccctctcttcttccttcctggactacaagcagcctggcctcagtatag
accagtggacaaagactagaccacttcattttcaatttctgcactaacaa
atcactccctaatctctatatctaaacttgttctgctctatacttctgct
gctccttgtcttagaaatatttttattcataattatttttctatgttgcc
tcttgatattcaaagaaatatccctgaagaaattatgatgtagctctatc
ctccacgccattgtaaagtttcaatgattgtaaagcctattaaatctgta
acaagaatttggc

gaattcagggcccatacctaaacatgataaaagcaatctacagcaaacca
ggagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaagactgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaggaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcggag
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaagtct
ctgaagagagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatcaccatcaaaaattccaactcaattctt
caacgaattagaaggagcaattttcaaattcatctggaataacaaaaaat
ctaggatagcaaaaactcttctcaaggataaaagaacctctggtggaatc
accatgcctgacctaaagctttactacagagcaattgtggtaaaaactgc
atgggtactggtatagagacagacaagtagaccaatggaatagaattgaa
gacccagaaatgaaccccacacacctatggtcacttgatcttcgacaagg
gagctaaaaccatccagtggaagaaagacagcattttcaacaattggtgc
tggcacaactggttggtatcatgtagagaatgcgattgctatcatgctga
agaaatgtggaatcgaatccatacttatcttcctagactaaggtcacatc
taatggaatcaaggactccataaacatgaaggcgctgaaccttctaggag
gagaagttggcggagaggcatagacgataggcacagggagaaacttccgg
actgaaaccccaatggcttgtggctggatgaactctggaaactttgacaa
ttgtgatactcatcagtgaaaccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_106829129_106830335
seq2: B6Ng01-340O13.b_45_1257

seq1  GAATTCTCTGTTTAGCACTGTAATCTATTTTTAATAGGGTTATTTCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTTTAGCACTGTAATCTATTTTTAATAGGGTTATTTCATTT  50

seq1  TCTGGAGTCCATCTTCTTGATTTCTTTACATATATTGGATATTAGTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGTCCATCTTCTTGATTTCTTTACATATATTGGATATTAGTCCCC  100

seq1  TATCTGATTTAGGATTGGTAAAGATCCTTTCCCAATTTGTTGGTGGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGATTTAGGATTGGTAAAGATCCTTTCCCAATTTGTTGGTGGCCTT  150

seq1  TTTTTTTTCCTTATGTTGGGATCATTTGTTTCTGCTGATTTCTACAAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTCCTTATGTTGGGATCATTTGTTTCTGCTGATTTCTACAAGCA  200

seq1  ACATATTTGGCCTTATTCCAAATTCTAGAGTTCAGTTTTTAAGCTGGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTTGGCCTTATTCCAAATTCTAGAGTTCAGTTTTTAAGCTGGTTC  250

seq1  TTTATTTTATCTGCTATGCATCACCCATCCATAAGTGTCTCTCTGGCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTATCTGCTATGCATCACCCATCCATAAGTGTCTCTCTGGCTCC  300

seq1  TAGAGCATTCTATTCCCCTGCTTCTTCTTACCCCTCTACCCCCCTCCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCATTCTATTCCCCTGCTTCTTCTTACCCCTCTACCCCCCTCCTCC  350

seq1  CAGATAAGGCATCTGACTAGGCACTTGGATCTCTTGGCTCTGGCCTGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAAGGCATCTGACTAGGCACTTGGATCTCTTGGCTCTGGCCTGTTA  400

seq1  CATCTGTTTGGGTATCTTTACTAAGGAAACTGACTCCCATTCCCCCTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTTTGGGTATCTTTACTAAGGAAACTGACTCCCATTCCCCCTGCT  450

seq1  CTCCCATCTTTCTCTAATGGATAAATGTCACCCTGAGCTGCGTGCTTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCATCTTTCTCTAATGGATAAATGTCACCCTGAGCTGCGTGCTTTGC  500

seq1  CTAATATTACTATGAAAGCCACACTGGTGTACCAGAAAACTCCTCTCACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATATTACTATGAAAGCCACACTGGTGTACCAGAAAACTCCTCTCACC  550

seq1  CTCCTTGGGATAAATTCATATTGAAAGGGGACACCTCTCCTCTGTGATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTGGGATAAATTCATATTGAAAGGGGACACCTCTCCTCTGTGATGT  600

seq1  GGAATATTTTTCTCTTTGAAAAGTTTCTTATTCTACTTTGAGATGTTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATTTTTCTCTTTGAAAAGTTTCTTATTCTACTTTGAGATGTTCTG  650

seq1  AATGGAAATTCTTGTCATGAGGACAGGTTTTCCACCTTATCTACTTTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAATTCTTGTCATGAGGACAGGTTTTCCACCTTATCTACTTTCTC  700

seq1  TCACTTCCTCCTAGGAGCCTGTAGTCTAGTAATTACCCTGTCTATCCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCCTCCTAGGAGCCTGTAGTCTAGTAATTACCCTGTCTATCCCCA  750

seq1  CCTATTGTGCTGCTTCTTCTGGTCTCAGCTCTCACCTAAAGATTCCTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTGTGCTGCTTCTTCTGGTCTCAGCTCTCACCTAAAGATTCCTCTC  800

seq1  CCTACTAGGAGCTGATTGCTCTGTCTCTTCAATAAGTGCCCCTAGCGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTAGGAGCTGATTGCTCTGTCTCTTCAATAAGTGCCCCTAGCGCTT  850

seq1  TCCTCCCTCTTGGAGCTTATAGAAATTTCTTCCAGTATATTTTCATTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCTCTTGGAGCTTATAGAAATTTCTTCCAGTATATTTTCATTTTT  900

seq1  GACCCTCTCTTCTTCCTTCCTGGACTACAAGCAGCCTGGCCTCAGTATAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTCTCTTCTTCCTTCCTGGACTACAAGCAGCCTGGCCTCAGTATAG  950

seq1  ACCAGTGGACAAAGACTAGACCACTTCATTTTCAATTTCTGCACTAACAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTGGACAAAGACTAGACCACTTCATTTTCAATTTCTGCACTAACAA  1000

seq1  ATCACTCCCTAATCTCTTATATCTAAACTTGTTCTGCTCTATACTTCTGC  1050
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATCACTCCCTAATCTC-TATATCTAAACTTGTTCTGCTCTATACTTCTGC  1049

seq1  TGCTTCCTTGTCTTAGAAATATTTT--ATCATTATTA--TTTCTATGT--  1094
      ||| |||||||||||||||||||||   |||| ||||  |||||||||  
seq2  TGC-TCCTTGTCTTAGAAATATTTTTATTCATAATTATTTTTCTATGTTG  1098

seq1  GCTC-TGATA-TCAAAGAAATAT-CCTGAAG--ATTATGATGTAAACTCT  1139
       ||| ||||| |||||||||||| |||||||  |||||||||| | ||||
seq2  CCTCTTGATATTCAAAGAAATATCCCTGAAGAAATTATGATGT-AGCTCT  1147

seq1  AT-CTC--AGCATTTGTAA--GTTCATTTGGGTATGGTTAAAAGGTCTAT  1184
      || |||   ||  ||||||   ||||       ||| ||  || | ||||
seq2  ATCCTCCACGCCATTGTAAAGTTTCA-------ATGATTGTAAAGCCTAT  1190

seq1  AAAATCTGTAACAAAAATTTGGC  1207
       ||||||||||||| ||||||||
seq2  TAAATCTGTAACAAGAATTTGGC  1213


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