BAC Information

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BAC

Clone NameB6Ng01-344N17
ChromosomeX (Build37)
Map Location 110,160,233 - 110,161,081
singlet/doubletsinglet
Overlap geneChm
Upstream geneLOC100038989, Tex16, LOC622570, 4933403O08Rik, EG385407, Apool, Satl1, EG623341, 2010106E10Rik, Zfp711, Pof1b, LOC623412, EG623428, LOC100039112
Downstream geneEG664918, Dach2, LOC237016
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344N17.bB6Ng01-344N17.g
ACCGA127235GA127236
length834859
definitionB6Ng01-344N17.b B6Ng01-344N17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcgaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcaagaattttgttgaggatttttgc
atcgatattcataagggaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagaaattgtggctttatagaatgagttg
ggtagagttccctctacttctattttgtggaatagtttgtgcagaactgg
aattagatcttctttgaaggtctggtagaactctgcactaaacccatctt
gtcctgggcttttttttttttttggttgggagactattaatgactgcttc
tatttccttaggggatatgggactgtttacatcattaacttgatcctgag
tttactttggggcctgaactccgactagaaatgatcccctttcaaccagg
ttttttcgttttattgagtgaaaactttcgtggaaagagctgacggtgtt
gtgcatcttgcgccgatccgataatttcacctctagctgattaatacaaa
tgcccccggccgatccctctcaatgagggcctcagttcctaaaaccaaga
aaatataaccgcttgtcctattccatcatacctagctgccgtagccaggc
tgatcgggccagcttttgaacactctaatctttc
gaattctatgggcactctacttcaatatgagagactcttcggatatcagc
agagattgttataatgatttaccgtccaatgtctatgtgtgctctggccc
tgactgtaatctaggaaatgataatgcagtccaacaggtaaggtgttggt
gttcctcagttttgtattaacaaattgatgtgctgggatacatgggggtg
ggggttgtccttgtaggaggagggaaaagagctactgcgaactgcagtgg
tactattaatattctttactatatatttcacttccttgaattatagaaga
aattgtaaagacgtatttatgagttgtactgtgagaataaagaatgaagt
tgaaaaaaatatatatgttcttaaaaatgaatttaaagtgccagtatttt
taaatattacttctaatataagcagttagattattggtgcattttttgaa
aacatagatgttgtcctccaacaaccttagccatttctagaaggatataa
ttagtaaagtatataagtgtataattttacagtggtgtgatgcatttctt
aatcttggaaaaaatgaataatcttattttacatagctaacataacacca
tcaatgttttgactcaaaccagtgctcgtttgagtttcaaactaaactca
aggctgccatttgtagttggcaagaagtatgtgaaattcaagtgggctag
ttcctaggtagagctgtgaaagaggtacatgctaattcttggttgccaaa
atcacacttttgattctcattgagcagaagattaataggacacagtagaa
atacacatcttttttacttggataggaagaaaaagtagagaagtggtgtt
tatgagaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_110160233_110161081
seq2: B6Ng01-344N17.g_66_924 (reverse)

seq1  TGTCTCA-AAACACACCTTCTCTTC-TTTTCTTCCTATCCAGGTAAAAAA  48
      ||||||| ||||||  ||||||| | ||||||||||||||| ||||||||
seq2  TGTCTCATAAACACCACTTCTCTACTTTTTCTTCCTATCCAAGTAAAAAA  50

seq1  GATGTGTA-TTCTACTGTGTCCTATTAATCTTCTGCTCAATG-GAATC-A  95
      |||||||| ||||||||||||||||||||||||||||||||| ||||| |
seq2  GATGTGTATTTCTACTGTGTCCTATTAATCTTCTGCTCAATGAGAATCAA  100

seq1  AAGTGTGCTTTTGGC-ACCTAGAATTAGCATGTACCTC-TTCACAGCTCT  143
      ||||||| ||||||| ||| |||||||||||||||||| |||||||||||
seq2  AAGTGTGATTTTGGCAACCAAGAATTAGCATGTACCTCTTTCACAGCTCT  150

seq1  ACCTAGG-ACTAGCCCACTTGAATTTCACATACTTCTTGCCAACTAC-AA  191
      ||||||| ||||||||||||||||||||||||||||||||||||||| ||
seq2  ACCTAGGAACTAGCCCACTTGAATTTCACATACTTCTTGCCAACTACAAA  200

seq1  TGGCAGCCTTGAGTTTAGTTTGAAACTCAAACGAGCACTGGTTTGAGTCA  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGCCTTGAGTTTAGTTTGAAACTCAAACGAGCACTGGTTTGAGTCA  250

seq1  AAACATTGATGGTGTTATGTTAGCTATGTAAAATAAGATTATTCATTTTT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTGATGGTGTTATGTTAGCTATGTAAAATAAGATTATTCATTTTT  300

seq1  TCCAAGATTAAGAAATGCATCACACCACTGTAAAATTATA-TCTTATATA  340
      ||||||||||||||||||||||||||||||||||||||||  ||||||||
seq2  TCCAAGATTAAGAAATGCATCACACCACTGTAAAATTATACACTTATATA  350

seq1  CTTTACTAATTATATCCTTCTAGAAATGGCTAAGGTTGTTGGAGGACAAC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTAATTATATCCTTCTAGAAATGGCTAAGGTTGTTGGAGGACAAC  400

seq1  ATCTATGTTTTCAAAAAATGCACCAATAATCTAACTGCTTATATTAGAAG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATGTTTTCAAAAAATGCACCAATAATCTAACTGCTTATATTAGAAG  450

seq1  TAATATTTAAAAATACTGGCACTTTAAATTCATTTTTAAGAACATATATA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTAAAAATACTGGCACTTTAAATTCATTTTTAAGAACATATATA  500

seq1  TTTTTTTCAACTTCATTCTTTATTCTCACAGTACAACTCATAAATAAGTC  540
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTTTTTTCAACTTCATTCTTTATTCTCACAGTACAACTCATAAATACGTC  550

seq1  TTTACAATTTCTTCTATAATTCAAGGAAGTGAAATATCTGGTAAAGTATA  590
      ||||||||||||||||||||||||||||||||||||| | |||||| |||
seq2  TTTACAATTTCTTCTATAATTCAAGGAAGTGAAATATATAGTAAAGAATA  600

seq1  TTTATAGTACCACTGCAGTTCACAGTAGTTCTTTTCCCTCCTCCTACAAG  640
      || |||||||||||||||||| |||||| |||||||||||||||||||||
seq2  TTAATAGTACCACTGCAGTTCGCAGTAGCTCTTTTCCCTCCTCCTACAAG  650

seq1  GACAACCCCCACCCCCATGTATCCCAGCACATCAATTTGTTAATACAAAA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACCCCCACCCCCATGTATCCCAGCACATCAATTTGTTAATACAAAA  700

seq1  CTGAGGAACACCAACACCTTACCTGTTGGACTGCATTATCATTTCCTAGA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAACACCAACACCTTACCTGTTGGACTGCATTATCATTTCCTAGA  750

seq1  TTACAGTCAGGGCCAGAGCACACATAGACATTGGACGGTAAATCATTATA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTCAGGGCCAGAGCACACATAGACATTGGACGGTAAATCATTATA  800

seq1  ACAATCTCTGCTGATATCCGAAGAGTCTCTCATATTGAAGTAGAGTGCCC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCTCTGCTGATATCCGAAGAGTCTCTCATATTGAAGTAGAGTGCCC  850

seq1  ATAGAATTC  849
      |||||||||
seq2  ATAGAATTC  859