MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-348D23
Chromosome	X (Build37)
Map Location	107,805,084 - 107,805,275
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC245573, EG634340, LOC668530
Downstream gene	LOC100043316, Pou3f4, Cylc1, LOC100042872, Rps6ka6, EG664791, D030011N01Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC245573 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:245573
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 ESTs, 25 Proteins pseudo : _no_value

name	EG634340 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:634340 MGI:3647708
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	LOC668530 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668530
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	LOC100043316 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043316
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein

name	Pou3f4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18994 MGI:101894
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cylc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67407 MGI:1914657
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042872 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042872
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Rps6ka6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67071 MGI:1914321
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG664791 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664791 MGI:3648496
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	D030011N01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245596 MGI:2685226
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043316 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271865 GeneID:100043316
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein product : hypothetical protein LOC100043316 transcript_id : XM_001479755.1

name	Pou3f4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679426 GeneID:18994 MGI:101894
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : POU domain, class 3, transcription factor 4 transcript_id : NM_008901.1

name	Cylc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125630302 GeneID:67407 MGI:1914657
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cylicin, basic protein of sperm head cytoskeleton 1 transcript_id : NM_026134.2

name	LOC100042872 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271829 GeneID:100042872
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to developmental pluripotency associated 5 transcript_id : XM_001478964.1

name	Rps6ka6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67625732 GeneID:67071 MGI:1914321
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein S6 kinase polypeptide 6 transcript_id : NM_025949.2

name	D030011N01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125628655 GeneID:245596 MGI:2685226
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D030011N01 gene transcript_id : NM_001080549.2

name	LOC100043316 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271866 GeneID:100043316
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479805.1

name	Pou3f4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679427 CCDS:CCDS30355.1 GeneID:18994 MGI:101894
definition	GO_component : GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : brain-4 class III POU-domain protein; sex linked fidget; POU domain, class 3, transcription factor 4 (Pou3f4) product : POU domain, class 3, transcription factor 4 protein_id : NP_032927.1

name	Cylc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125630303 GeneID:67407 MGI:1914657
definition	GO_component : GO:0043159 - acrosomal matrix [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : cylicin, basic protein of sperm head cytoskeleton 1 protein_id : NP_080410.2

name	LOC100042872 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271830 GeneID:100042872
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479014.1

name	Rps6ka6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67625733 CCDS:CCDS30356.1 GeneID:67071 MGI:1914321
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 product : ribosomal protein S6 kinase polypeptide 6 protein_id : NP_080225.2

name	D030011N01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:123703979 GeneID:245596 MGI:2685226
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : hypothetical protein LOC245596 protein_id : NP_001074018.1

name	LOC668530 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668530
definition	number : 1 pseudo : _no_value

name	LOC668530 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668530
definition	number : 2 pseudo : _no_value

name	EG664791 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664791
definition	number : 1 pseudo : _no_value

name	EG664791 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664791
definition	number : 2 pseudo : _no_value

name	EG664791 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664791
definition	number : 3 pseudo : _no_value

name	LOC245573 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271863 GeneID:245573
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 ESTs, 25 Proteins product : similar to nuclear pore-targeting complex component of 58 kDa pseudo : _no_value transcript_id : XR_034361.1

name	EG634340 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149271864 GeneID:634340 MGI:3647708
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG634340 pseudo : _no_value transcript_id : XR_002195.2

clone name	MSMg01-474A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159F21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-502P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016P04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-348D23.b	B6Ng01-348D23.g
ACC	GA129597	GA129598
length	1,205	945
definition	B6Ng01-348D23.b	B6Ng01-348D23.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcaaggcccataccaaaacatagtaaaagcaatatacagcaaacca gtaggtaacatcaaactaaatggagagaaacttgaggcaatcccactaaa atcagggactagacaagcctacccacttactccctactgagtcaatacag tactcaaagtcctagccagagcaattagacaacaaaagaagtcaaaagga tgcaaattggaaaggaagaaataaaagtatcactgtttgcaaatgatata attagtatacttaattgacccaaagaattccacaagagaacacctaaagc tcataaacaactacagcaaagtagctggatacaaacaaatcagaagccta ctctactcaaaggataaacagattaagaaaaaaaaattagggaaatgaca cccttcataatagtcacaaataatctaaaataccttggtgtgactctaac caagcaaatgaaagatctgtatgacaagaacttcaagtctctgaacaaag aaatcaaatataattttagaagatgaaaagatctcctatactcatggatt ggcaggattaatatagtgaaaattaatattgccaaaagcaatccacacat tcaatgcaatcccatcaaaattctaatccaattctttataaagttagaaa gcagaatttgtaaatttatttggaacaacaaaaaaaaccaggataacaaa aactattcccaacaacaaaggaaattctgctggaatcaccattcctggcc tcaagctgtactacaaatcaagactgcatgttattggtacagatacaggc agcaagatcaatgatatagaaatgaagaccaaaaaatgaacccacacacc tattgtcatttgatctttgaaacaggagctaaaaccatccagtggaaaaa agacatcatttttcaaccaatagtgctggctcaactgggtgggtcagcat gtgaaagattgcacatcaattcattcttatctcgttttacaaagctcaag ttccaacgggttcaggacctcccacataaaatcagataccactgaaacct aatagaaaagaaagttggggaagagccttgaacccattgccccaaggaaa tgcctcctggaaccgaacagcatgcttgtgtccctagattcgaattgcaa tgggatctcaataatggtaagcttctggtaaagggtcaagaaattacctg ttgct	gaattcagcatagcgacacactattggcttattcaaacatcagcagaaaa attacatgtacgagcagggtgtcagagttctgtgagttgttgactcagtt tagatagccctgttatgtcttcacattcccctttatcttatggtcaagct gttcccaggaatgttttaactacggggcatacccaggtttgtttttcctt tttctcagcaccaggcagcctctaggctcacaaacaaccagcaatttctg agtactttatatgacattcaggtttgaaatttcatctttctttcaaaaga aagcatatgttatctgaattgctgagggtgatgtgtgttttgttttaatt agaaacacatttattccttgtttttcatgacctatgatttttttcagctt ttttctattgttttgaactctttctctctctctttttttatttatagttg ctttttgttcccttggatattttcattatttacatttcaaatattttcct ctttccaggtctccccttctgaaaccccttatcctactccccgtgtctgt ctctatgtggatgttcccccaccaactcacttgcatcctcccaacctggc attcccttacactggggcattgaacaccctcaggcccgagggtctctcct cccattgatgtccaacaaggccatcttctgccacatatgtggacagcacc atgggtcactctatgtgtattctttggttggtgctccagttcccaggagc tccagggttctggacagttgacactgttgctgaaaaacctctctgctcct tcaatcccttctctctctccttcattggggacctgcctaatggttggctg caagcttcctgctctgtattttcttaggcactggtggagcttctcaggac atagtcatatctggcttctgtaagcaagcacttctcggcatccac
quality values	Open. Hide. 58 38 29 26 58 34 18 28 62 62 62 62 41 25 62 62 62 47 39 62 62 62 45 47 62 62 62 54 62 62 62 62 62 62 56 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 59 59 59 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 54 62 62 62 56 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 47 54 62 62 62 52 46 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 62 47 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 47 58 58 58 58 58 58 54 58 58 58 58 58 58 52 54 52 52 54 54 47 58 58 58 38 54 58 58 54 58 54 58 58 54 41 58 58 58 54 58 58 58 58 58 58 54 58 58 58 52 58 58 58 54 58 54 54 58 48 36 39 58 58 58 51 58 58 58 58 58 58 51 52 54 58 51 58 58 58 50 58 58 58 51 58 41 58 49 54 49 50 58 46 27 58 58 43 58 58 58 51 50 49 49 50 38 27 47 50 51 51 58 58 58 44 50 40 43 43 49 51 48 50 52 52 50 50 53 48 48 33 58 24 35 58 41 58 51 42 41 42 49 58 51 47 58 58 58 51 41 51 50 40 29 28 36 9 52 58 49 49 50 39 40 34 37 39 41 58 39 39 37 54 50 54 44 44 25 21 40 50 52 51 46 33 44 31 21 39 44 41 39 22 11 50 50 32 49 49 54 45 52 41 42 39 38 49 42 51 44 39 26 34 31 13 35 30 41 50 32 40 49 51 54 51 18 18 50 32 21 42 41 52 52 52 37 29 34 33 39 42 32 54 49 44 38 40 35 31 34 21 37 53 42 32 32 53 39 38 37 41 37 54 54 32 32 47 24 41 34 31 32 51 31 53 46 32 32 40 47 47 31 46 31 31 34 24 32 37 53 39 29 32 41 32 19 25 40 28 31 35 34 33 24 32 24 32 31 31 46 46 46 30 31 31 22 31 31 41 20 20 45 30 51 33 44 33 30 27 32 22 46 26 31 24 30 51 31 36 31 27 27 41 46 30 33 29 41 25 29 21 14 31 31 18 31 37 37 46 30 28 30 29 16 13 9 14 24 31 14 26 28 19 46 46 46 41 38 26 30 20 13 31 33 25 18 48 47 46 27 25 21 37 8 12 32 32 27 37 26 8 32 26 32 31 30 21 31 28 21 21 31 33 24 43 19 10 15 44 16 27 34 25 27 29 32 31 35 23 22 26 44 11 9 31 7 11 27 5 8 17 19 32 21 17 30 10 29 16 17 25 25 26 28 6 6 11 14 13 32 10 27 34 43 34 21 25 16 31 21 22 13 29 24 17 17 26 13 11 20 11 11 10 13 10 36 17 9 7 6 19 18 17 21 15 20 25 9 36 8 11 9 16 26 17 34 34 23 15 19 6 9 14 11 9 17 6 4 6 9 9 12 32 22 8 13 16 21 12 10 6 8 27 34 47 19 8 8 40 18 5 6 5 6 9 31 5 3 6 9 13 5 8 17 18 10 11 13 16 6 8 5 2 3 3 16 6 3 4 3 3 3 2 5 7 27 17 5 11 10 6 16 10 25 8 10 5 16 9 5 3 5 15 10 9 9 6 12 16 6 13 4 9 11 5 4 14 9 10 9 5 5 3 1 18 5 8 11 6 2 5 2 4 5 1 2 4 1 4 22 12 2 5 6 4 6 12 10 6 1 5 2 2 4 4 3 8 12 12 18 6 10 5 7 8 5 3 8 5 9 16 22 4 6 9 3 4 14 29 8 5 7 13 10 13 21 18 7 16 4 9 5	Open. Hide. 46 35 39 39 62 47 47 62 62 23 32 32 10 21 20 16 21 16 22 56 43 35 62 62 62 62 62 62 62 49 62 62 62 59 51 62 62 62 59 62 59 59 62 62 62 62 62 62 62 54 62 59 62 59 59 43 48 49 29 36 48 35 59 62 62 62 62 62 54 54 62 62 62 62 62 54 59 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 59 62 62 62 62 54 54 62 62 59 59 59 59 62 59 56 62 59 59 59 59 54 62 62 59 59 59 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 56 62 56 62 56 56 56 62 62 62 62 62 62 62 62 62 62 62 62 46 56 56 62 62 54 62 62 62 62 62 62 62 62 47 51 56 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 62 52 62 52 62 62 62 62 48 52 52 47 47 52 48 62 62 49 54 58 54 58 58 58 54 54 58 58 58 58 52 52 52 52 46 52 58 58 54 58 58 58 58 58 58 58 52 46 30 47 52 52 58 52 43 40 48 49 52 58 58 50 50 50 41 27 41 47 40 52 58 58 58 54 52 42 41 30 41 52 48 52 52 52 52 52 52 52 52 52 47 28 41 48 49 58 58 50 58 58 54 50 51 46 51 54 54 58 51 58 58 54 38 58 50 43 47 41 26 41 34 42 34 23 40 48 47 50 50 47 42 43 43 44 42 46 50 41 42 42 42 39 34 37 50 39 34 44 50 42 42 50 53 49 37 34 33 42 50 50 48 42 48 48 58 41 49 50 42 50 41 51 50 47 42 42 40 35 23 34 50 42 40 24 44 31 33 27 31 46 20 58 58 41 39 53 42 50 28 27 40 30 20 22 29 50 49 50 39 34 50 44 31 37 24 49 40 40 41 29 41 19 22 30 42 37 50 46 32 42 36 24 22 23 38 40 53 54 52 54 50 44 40 28 30 32 39 29 25 25 40 37 41 49 33 49 38 42 40 32 47 45 44 54 37 54 47 54 40 37 45 42 40 37 54 33 46 47 31 41 47 54 32 40 31 45 26 33 25 31 47 26 24 40 23 30 31 32 40 18 32 28 18 36 28 28 52 51 31 45 31 45 35 32 33 13 31 31 31 34 32 41 31 24 21 32 41 31 38 31 30 42 30 42 51 51 43 42 25 29 30 29 38 31 34 40 27 45 29 36 31 20 24 13 33 26 29 30 24 27 40 19 31 21 6 10 16 19 26 21 26 28 16 31 31 32 31 29 40 40 18 23 14 25 27 32 27 20 27 35 31 32 37 26 27 31 33 31 22 37 28 18 14 27 27 32 41 27 32 32 32 31 32 34 26 31 31 23 26 32 47 46 6 8 16 22 31 21 16 9 16 18 24 28 31 21 39 28 33 19 31 31 22 23 28 32 20 10 26 20 9 14 30 26 20 17 32 21 31 24 27 22 25 30 26 23 37 27 26 25 31 32 28 32 21 15 17 36 22 11 15 17 11 22 21 5 5 12 20 18 22 23 24 24 20 22

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_107805084_107805275
seq2: B6Ng01-348D23.g_482_687

seq1  CTCTTTCTCTCTCTCTCT---------------CTTTTAAT----TTGGA  31
      |||||||||||||||| |               |||||  |    |||||
seq2  CTCTTTCTCTCTCTCTTTTTTTATTTATAGTTGCTTTTTGTTCCCTTGGA  50

seq1  TATTTTCTTTATTTACATTTCAAATGTTATCCCCTTTCCCATTTTCCCC-  80
      ||||||| ||||||||||||||||| || ||| ||||||   | ||||| 
seq2  TATTTTCATTATTTACATTTCAAATATTTTCCTCTTTCCAGGTCTCCCCT  100

seq1  TCTGAAAATGCCCAGCCCAGCCCACCTCCCC----CTGCATCTATGAGGG  126
      |||||||   |||  |  | || | ||||||    |||  |||||| || 
seq2  TCTGAAA---CCC--CTTATCCTA-CTCCCCGTGTCTGTCTCTATGTGGA  144

seq1  TGCTCTGCTACCCATTCATCAATTGCCACATCCCCACCCTGGCATTACCC  176
      || ||  | ||| |    ||| ||||  | | |||| ||||||||| || 
seq2  TGTTCCCCCACCAA---CTCACTTGCATCCT-CCCAACCTGGCATTCCCT  190

seq1  TACACTGGGGCATTGA  192
      ||||||||||||||||
seq2  TACACTGGGGCATTGA  206

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information