Query= MSMg01no045_h01.b1 MSMg01no045_h01.b1 CHROMAT_FILE:
MSMg01no045_h01.b1 PHD_FILE: MSMg01no045_h01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:24 2005
(656 letters)
>mm_chrX_80262634_80263689
Length = 1056
Score = 1222 bits (632), Expect = 0.0
Identities = 647/652 (99%)
Strand = Plus / Minus
Query: 5 gaattctgcagaagaggaaggattgtaggagccagggggtgtcaagaacaccataagaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 gaattctgcagaagaggaaggattgtaggagccagggggtgtcaagaacaccataagaaa 877
Query: 65 tccctctaagtcaacaaacccagatttctatatggcatgtagttattttaccagcaatct 124
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 tccctctaagtcaacaaatccagatttctatatggcatgtagttattttaccagcaatct 817
Query: 125 ccccaagccccccactaaaggccattacaggagttccactttcttagtcagaaacagtca 184
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 816 ccccaagccccccactaaaggccattgcaggagtcccactttcttagtcagaaacagtca 757
Query: 185 tcagttttgaggtattagcctttgacttatagtttgtagctataatcactttgtggtgag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 tcagttttgaggtattagcctttgacttatagtttgtagctataatcactttgtggtgag 697
Query: 245 ttagagactctgatgcccttaattcaatcatcaatttaaatgctatattgagctctgttt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 ttagagactctgatgcccttaattcaatcatcaatttaaatgctatattgagctctgttt 637
Query: 305 ttcccagtcctcataaatttcttaacttttgtacatgtcccttttcatattatttcttga 364
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 ttcccagtcctcgtaaatttcttaacttttgtacatgtcccttttcatattatttcttga 577
Query: 365 ttaaaaccaaaacattcccatctttaaattacctaacttcactgaaagaaatagaggaac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ttaaaaccaaaacattcccatctttaaattacctaacttcactgaaagaaatagaggaac 517
Query: 425 atgaagtaatacgcagaagcaacttcaggggttagaatctagtcagggacaatgccttgg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 atgaagtaatacgcagaagcaacttcaggggttagaatctagtcagggacaatgccttgg 457
Query: 485 tgagaaagaaaacaattgcctcaggagccaacccagaccagtttgcatggattgtttgtc 544
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 456 tgagaaagaaaacaattgcctcgggagccaacccagaccagtttgcatggattgtttgtc 397
Query: 545 ttctccaaagcttgccttttagtccacaccagcattctacactgggcaggcctgggcagt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ttctccaaagcttgccttttagtccacaccagcattctacactgggcaggcctgggcagt 337
Query: 605 gcagaaatagctcaagggtgcatagcatctttaaacacattccactaaaata 656
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gcagaaatagctcaagggtgcatagcatctttaaacacattccactaaaata 285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no045_h01.g1 MSMg01no045_h01.g1 CHROMAT_FILE:
MSMg01no045_h01.g1 PHD_FILE: MSMg01no045_h01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:24 2005
(627 letters)
>mm_chrX_80168661_80169688
Length = 1028
Score = 1199 bits (620), Expect = 0.0
Identities = 626/628 (99%), Gaps = 1/628 (0%)
Strand = Plus / Plus
Query: 1 agcagcaggttttccaagcagaacaattcagtcagaagctcagagaacccgttttttaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcagcaggttttccaagcagaacaattcagtcagaagctcagagaacccgttttttaat 260
Query: 61 ccccttggagttgaaccagccagccagagttcagaaagagcaagaaagggtgagtttatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccccttggagttgaaccagccagccagagttcagaaagagcaagaaagggtgagtttatc 320
Query: 121 catctataagtcttggaggctgaaacattctagacctatgttaggagatgaggctggatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catctataagtcttggaggctgaaacattctagacctatgttaggagatgaggctggatg 380
Query: 181 ctgaagccttcaaggttcatgcttggagaagattagattgtacagagactagaagcttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgaagccttcaaggttcatgcttggagaagattagattgtacagagactagaagcttcc 440
Query: 241 aggcctagaactagggatacagagaaattctctggattcatctcaagccgtgtattctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggcctagaactagggatacagagaaattctctggattcatctcaagccgtgtattctat 500
Query: 301 tcataatacttgggtaaggttcccgtctctatcccttcatcagaggaagtaaaagagaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcataatacttgggtaaggttcccgtctctatcccttcatcagaggaagtaaaagagaca 560
Query: 361 tttacagaggtgtatatatttctaaaaatatatttagttaactacaatgatatatgtgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttacagaggtgtatatatttctaaaaatatatttagttaactacaatgatatatgtgct 620
Query: 421 agcttttagtctagcacagagctatagttgtgagcg-aaaaaaaaaaggcagaagtaaaa 479
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 621 agcttttagtctagcacagagctatagttgtgaggggaaaaaaaaaaggcagaagtaaaa 680
Query: 480 tatccagtttcatcctgttaattttgccacattgcaataaggtcattgcacaatcttgtg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tatccagtttcatcctgttaattttgccacattgcaataaggtcattgcacaatcttgtg 740
Query: 540 cttgcatacagacacatgaaaattctataattttaatgtattacttctaaaggagagtaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cttgcatacagacacatgaaaattctataattttaatgtattacttctaaaggagagtaa 800
Query: 600 aatatatgtaggtgatgggatttatgtg 627
||||||||||||||||||||||||||||
Sbjct: 801 aatatatgtaggtgatgggatttatgtg 828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1028
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1018
Effective search space: 628106
Effective search space used: 628106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
