CAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCCGCGGAAT
TCAAGACTAGATCTTCTCAACATACATTTTTATATATACTTAATATTCTC
TGACAAAAATATTTAATATAGCTTGTAATACTGTATCTTATTATGAAAAG
AGCTTTAAAATGTCTTTTTACTGTTCGGGTCACAAATGTGTGTGGTAACA
CATAGTGGGTATCAGCAGATAAAAGTGTGAGCTGATGCATTGTTTTAATC
TTGCCTTGATAAATGTAATTTTATTAATATATACATTTATACCAGAACGC
CATGCTCTCTTGCAATATAAGCATACAACTGGTTCTTTTTCTTTTTTTAT
TAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCAT
ACCCACCCACCCCCACTCCCCTACCCACCCACTCCCCCTTTTTGGCCCTG
GCGTTCCCCTGTACTGGGGTATTGAAAGTTTGCGTGTCCAATGGGCCTCT
CTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGTTAGA
GTCAAGAGCTCCAGGGTACTGTGTAGTTCATATTGCTGTTCCACCTATAG
GGTTGCAGATTCCTTTTAGTTCCTTGTATACTTTCTCTAGCTCCTCCATT
GGTATCCCTGCGATCCATCTCATTAGTTGACTGTTATCCTTTACTTTTGC
GCTTTC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCCCAGAAAAAATGTTACCATTATATGGAT
GATGTCCTTTTGGCAGCACCGACGGAGGAAATGCTGGATTTGGCATATAG
TAAGACCACACAACAGCTACAAAAGGGAAGGCTTACAGTAGCCCCTGAAA
AGGTGCAGAAGGGCAAGGTCATCCATTATTTAGGAAGCAAAATAACAGAA
AGATATATAACTCCACAGAAGATTTAAATTAGAACTGATCATCCAAGGAC
TTTAAATGATTTTCAAAAGTTGCTAGGAGATATTCAATGGGTTAGGCCTT
ATTTGGGTCTAACAAATAAGCAATTGCAACCTCTTTATGACATCTTGCCA
GGAGCGACAGCCCTAGATTCAGAGAGAGTTCTTACAGAAGAAGGAAGGGA
GTTAAAGTTAGTAGAGAAGGCTATTCAAATTGCTGCTTTAAAGAGGAGAG
AGGTTGACCTTCCTATATCATTATGTATTTTGCCATCAGAAAATCAACCT
ATTGGAGCCCTTTGGCAAGGGACTCCTTTATTATGGATCCATCCTAAAAT
TTCCCCCGCCAAAGTGTTATCCTATTATCCTGTCTCTGTTGCCCAATTGG
CATTGCTGGATTTACAGCAATGCATGCAGCATTTTGGCACCCCTCCTGAT
G

Query= MSMg01no046_b19.b1 MSMg01no046_b19.b1 CHROMAT_FILE:
MSMg01no046_b19.b1 PHD_FILE: MSMg01no046_b19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:13 2005
         (468 letters)



>mm_chrX_119199782_119200648
          Length = 867

 Score =  764 bits (395), Expect = 0.0
 Identities = 447/467 (95%), Gaps = 8/467 (1%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattcaagactagatcttctcaacatacatttttatatatacttaatattctctgacaa 66
           |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 207 gaattcaagactagat-ttctcaacatatatttttatatatacttaatattctctgacaa 265

                                                                       
Query: 67  aaatatttaatatagcttgtaatactgtatcttattatgaaaagagctttaaaatgtctt 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aaatatttaatatagcttgtaatactgtatcttattatgaaaagagctttaaaatgtctt 325

                                                                       
Query: 127 tttactgttcgggtcacaaatgtgtgtggtaacacatagtgggtatcagcagataaaagt 186
           |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 326 tttacttttcgggtcacaaatgtgtgtggtaacacatagtgcgtatcagcagataaaagt 385

                                                                       
Query: 187 gtgagctgatgcattgttttaatcttgccttgataaatgtaattttattaatatatacat 246
           ||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 386 gtgagctgatgcattattttaatcttgccttgatcaatgtaattttataaatatatacat 445

                                                                       
Query: 247 ttataccagaacgccatgctctcttgcaatataagcatacaactggttctttttct---t 303
           ||||||||||||||||||||||||||||||||||||||||||||| || ||||| |   |
Sbjct: 446 ttataccagaacgccatgctctcttgcaatataagcatacaactgtttttttttttccat 505

                                                                       
Query: 304 tttttattaggtatttagctcatttacatttccaatgctataccaaaagtcccccatacc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 506 tttttattaggtatttagctcatttacatttccaatgctataccaaaagtcccccattcc 565

                                                                       
Query: 364 cacccacccccactcccctacccacccactccccctttttggccctggcgttcccctgta 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 cacccacccccactcccctacccacccactccccctttttggccctggcgttcccctgta 625

                                                          
Query: 424 ctgggg--tattgaaagtttgcgtgtccaatgggcctctctttccag 468
           ||||||  |||  ||||| || |||||||||||||||||||||||||
Sbjct: 626 ctggggcatat--aaagtctgtgtgtccaatgggcctctctttccag 670


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 867
Length adjustment: 10
Effective length of query: 458
Effective length of database: 857
Effective search space:   392506
Effective search space used:   392506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)