Query= MSMg01no046_l06.b1 MSMg01no046_l06.b1 CHROMAT_FILE:
MSMg01no046_l06.b1 PHD_FILE: MSMg01no046_l06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:55 2005
(488 letters)
>mm_chrX_88162073_88162960
Length = 888
Score = 905 bits (468), Expect = 0.0
Identities = 480/484 (99%)
Strand = Plus / Minus
Query: 5 gaattccttccatttccccctctttgaccaaaccagtgttgcactgattaatgtcatctt 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gaattccttccatttcatcctctttgaccaaaccagtgttgcactgattaatgtcatctt 629
Query: 65 gtactttaagaagaatcttgcattgccttttagtctttatttcccctcatccagcttgag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gtactttaagaagaatcttgcattgccttttagtctttatttcccctcatccagcttgag 569
Query: 125 aagaatgttctagagtgctgtttcaaattcatctttactttcagaaatgtagatgtatga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 aagaatgttctagagtgctgtttcaaattcatctttactttcagaaatgtagatgtatga 509
Query: 185 atcattgctaaacctgttttacactctaaatagagccataacagccaattcatatctcca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 atcattgctaaacctgttttacactctaaatagagccataacagccaattcatatctcca 449
Query: 245 caagaaacacatgttgaaagctatagaaatttgatttttttgcaaatttgtagtagatac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 caagaaacacatgttgaaagctatagaaatttgatttttttgcaaatttgtagtagatac 389
Query: 305 atttgaaggtcatacttcaggcctgggacacaggtggatggctctgagactttgtaactt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 388 atttgaaggtcatacttcaggcctgggacacaggtggatggctctgagactttgttactt 329
Query: 365 aaaattttcactactccctgttgaattaaaatttaattaaatactcacagtcagctgcaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 aaaattttcactactccctgttgaattaaaatttaattaaatactcacagtcagctgcaa 269
Query: 425 gggactcctttttttaaaactgggaggtcatctgtctgttcttttgtttacctattggat 484
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 268 gggactcctttttttaaaactgggaggtcatctgtctgttcttttgtttacatattggat 209
Query: 485 aaat 488
||||
Sbjct: 208 aaat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space: 419684
Effective search space used: 419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no046_l06.g1 MSMg01no046_l06.g1 CHROMAT_FILE:
MSMg01no046_l06.g1 PHD_FILE: MSMg01no046_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:55 2005
(334 letters)
>mm_chrX_87997180_87997913
Length = 734
Score = 601 bits (311), Expect = e-176
Identities = 329/335 (98%), Gaps = 2/335 (0%)
Strand = Plus / Plus
Query: 1 ttggtctcgtttgcatccagaaaccatttctatttagtctgggtggcaaactgaagaa-a 59
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 201 ttggtctcgtttgcatccagaaaccatttctatttagtctgggtggcaaactgaa-aaca 259
Query: 60 gtacagtagtagataaggacatggattatcaaaaaacagaaaacccatatagtgtacttc 119
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 260 gtacagtagtagataaggacatggattgtcaaaaaacagaaaacccatatagtgtacttc 319
Query: 120 attattttctcaagcaaaggccttctgccagaagagaatgtgactgtgatagtgactgcc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 attattttctcaagcaaaggccttctgccagaagagaatgtgactgtgatagtgactgcc 379
Query: 180 agagagaatattttatatgaatgtgtaccaatttgacctactgttagaagttcaaagatg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 agagagaatattttatatgaatgtgtaccaatttgacctactgttagaagttcaaagatg 439
Query: 240 ggttccactttgtctttcatatctgattaatagctaaatatccaaaatctcatatttttt 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 440 ggttccactttgtctttcatatctgattaatagctaaatatccaaaatctcatattttgt 499
Query: 300 attaataatgttatgccaagatgaaaggaagctgc 334
||||| ||||||||| |||||||||||||||||||
Sbjct: 500 attaagaatgttatgtcaagatgaaaggaagctgc 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
