Query= MSMg01no058_i14.b1 MSMg01no058_i14.b1 CHROMAT_FILE:
MSMg01no058_i14.b1 PHD_FILE: MSMg01no058_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:48 2005
(402 letters)
>mm_chrX_40329745_40330548
Length = 804
Score = 743 bits (384), Expect = 0.0
Identities = 397/402 (98%), Gaps = 2/402 (0%)
Strand = Plus / Minus
Query: 1 aaagttttatgtgacgtgaatcgccaacatcttgaatgtctcctactatagcagtactac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aaagttttatgtgacgtgaatcgccaacatcttgaatgtctcctactatagcagtactac 543
Query: 61 atttcttagaagctaataaccatagtttcttagtaaaatgta--gtttaaagtgtgtaaa 118
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 542 atttcttagaagctaataaccatagtttcttagtaaaatgtactgtttaaagtgtgtaaa 483
Query: 119 tatacactggtccttggagggtgctaattttaacctgaaatgtttcagaacaagatagta 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tatacactggtccttggagggtgctaattttaacctgaaatgtttcagaacaagatagta 423
Query: 179 aactaagaaatgagtgtttgggcataaagtatgaaaatgtcattcaagtgccactgttgt 238
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 422 aactaagaaatgagtgtttgggcataaagtatgaaaatgtcattcaagtgccactgctgt 363
Query: 239 acctcatctcatcagtgtgtttatatacaaagtaagtatctataataacttcagcccttt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 acctcatctcatcagtgtgtttatatacaaagtaagtatctataataacttcagcccttt 303
Query: 299 ttgtctaatttcccatgatcttatttctgattccacacgagtcacgataactctttttaa 358
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 302 ttgtctaatttcccatgatcttatttctgattccacactagtcacgataactctttttaa 243
Query: 359 atgaaggttaatctggagctttctttttggtttctttgctaa 400
|||||||||||||||||||||||||||| |||||||||||||
Sbjct: 242 atgaaggttaatctggagctttcttttttgtttctttgctaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 804
Length adjustment: 9
Effective length of query: 393
Effective length of database: 795
Effective search space: 312435
Effective search space used: 312435
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no058_i14.g1 MSMg01no058_i14.g1 CHROMAT_FILE:
MSMg01no058_i14.g1 PHD_FILE: MSMg01no058_i14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:48 2005
(244 letters)
>mm_chrX_40201677_40202320
Length = 644
Score = 462 bits (239), Expect = e-135
Identities = 242/243 (99%)
Strand = Plus / Plus
Query: 1 ataagggaacttaatcaaaatcccacattgcttcagggtagctttatgtgaaatgaaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataagggaacttaatcaaaatcccacattgcttcagggtagctttatgtgaaatgaaatt 260
Query: 61 tttattgtatcgaaagtttcactctataaatatttttttattttcaaaattggcaacata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttattgtatcgaaagtttcactctataaatatttttttattttcaaaattggcaacata 320
Query: 121 tttgaaaactttaattggtttatactcaaaagcactggagacaaagaaaatttgcttaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgaaaactttaattggtttatactcaaaagcactggagacaaagaaaatttgcttaca 380
Query: 181 caagaagtggacttattctcttcacataaggtagttctttcaagtgataatgaaatttaa 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagaagtggacttactctcttcacataaggtagttctttcaagtgataatgaaatttaa 440
Query: 241 tgt 243
|||
Sbjct: 441 tgt 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
