Query= MSMg01no066_n12.b1 MSMg01no066_n12.b1 CHROMAT_FILE:
MSMg01no066_n12.b1 PHD_FILE: MSMg01no066_n12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:46 2005
(459 letters)
>mm_chrX_38701105_38701964
Length = 860
Score = 859 bits (444), Expect = 0.0
Identities = 456/460 (99%), Gaps = 1/460 (0%)
Strand = Plus / Plus
Query: 1 tttggttaaaaaaa-tttttttgagaacagagacctgtgcttcagtcccatgatgaagct 59
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttggttaaaaaaattttttttgagaacagagacctgtgcttcagtcccatgatgaagct 260
Query: 60 caaggagcaaaccttgtaaatatgacctagagaagtttagatagaaaactcctaaggcct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaggagcaaaccttgtaaatatgacctagagaagtttagatagaaaactcctaaggcct 320
Query: 120 attaaggaggacataggacgatatacttatcacaaaggtaatttggattgtgacccaaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attaaggaggacataggacgatatacttatcacaaaggtaatttggattgtgacccaaaa 380
Query: 180 gaagcctcacctatgcctagactgggtcttgggagggaccttaaacaaagcaaatgtgta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagcctcacctatgcctagactgggtcttgggagggaccttaaacaaagcaaatgtgta 440
Query: 240 ggatcgtattcttctatacaaaacttatctttagccattaggcactgaaatagtccaaca 299
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggagcgtagtcttctatacaaaacttatctttagccattaggcactgaaatagtccaaca 500
Query: 300 agttgttcacaaatggattcagtactgactggttggtccttggtctgtatctccccaagt 359
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agctgttcacaaatggattcagtactgactggttggtccttggtctgtatctccccaagt 560
Query: 360 gacagtaacaagttaggaaatgccaccctgatgatgtgaggcaatatattaaatcccttg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gacagtaacaagttaggaaatgccaccctgatgatgtgaggcaatatattaaatcccttg 620
Query: 420 agtattggtgtctgtagagctaactgcagtgaattacaca 459
||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agtattggtgtctgtagagctaactgcagtgaattacaca 660
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 860
Length adjustment: 10
Effective length of query: 449
Effective length of database: 850
Effective search space: 381650
Effective search space used: 381650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_n12.g1 MSMg01no066_n12.g1 CHROMAT_FILE:
MSMg01no066_n12.g1 PHD_FILE: MSMg01no066_n12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:47 2005
(202 letters)
>mm_chrX_38819528_38820130
Length = 603
Score = 377 bits (195), Expect = e-109
Identities = 201/203 (99%), Gaps = 1/203 (0%)
Strand = Plus / Minus
Query: 1 cttggagagacttgaagagatc-tatagactagtgatttcttaaaggagtgatatgagaa 59
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 403 cttggagagacttgaagagatcatatagactagtgatttcttaaaggagtgatatgagaa 344
Query: 60 agacttaagtgtccattgctagctttggaatcagaaagagtgcatggtctaaggaatgtt 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 agacttaagtgtccattgctagctttggaatcagaaagagtgcatggtctaaggaatgtg 284
Query: 120 agggccctctaaacatcagaaaaggcattctaatgagctccttttcatggcatctggagc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 agggccctctaaacatcagaaaaggcattctaatgagctccttttcatggcatctggagc 224
Query: 180 tcaatgcagtcctgctaacacct 202
|||||||||||||||||||||||
Sbjct: 223 tcaatgcagtcctgctaacacct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 202
Length of database: 603
Length adjustment: 8
Effective length of query: 194
Effective length of database: 595
Effective search space: 115430
Effective search space used: 115430
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
