TCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAACTTTATCACCAAAAATAACAGGAAGCAACAATTACTTTTCTTT
AATATCTCTTAATATCAATGGACCCAATTTCCCAATAAAAAGACATAGAC
TAGCAGACTAACAACACAAACAGGACCCAACATTTTGCTGCTTACAAGAA
ACCCACCTCAGGGAAAAAGACAGACACTACCTCAGAATGAAAGGCTGGAA
AACAATTTTCCAAGCAAATGGTCTGAAGAAACAAGCTGGAGTAGCCATTC
TAATATCAAGTAAAATTGACTTCCAACCAAAAGTTTTCAAAAAAGACAAG
GAGGGGCACTTCATACTCATCAAAGTTAAAATTTACAAAAATGAACTCTC
AATCCTGAATATCTATGCTCCAAATGGAAGGGCAGCCACATTCATTAAAG
AAACTTAAGTAAAGATCAAAGCACACATTGCACCTCCCACAATAATAGTA
GGAGACTTCAATACCCTACCCTCATCAATAGACAGATCCTGGAAACAGAA
ACTAAACAGAGACACAGTGAAACTAACAGAAGTTATGAAACAAATGGATT
TAAAAGATATTTATAGAACATGCTATCCTAAAACAAAAGGATACACTTTT
TTTTTCTCAGCACCTCATGGTACCTACTCAAAACAGACTAATAGGTCAAA
TAAC

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTACTGTTCACATTCATGTGACTC
CAGAGAACAGGGGAATCCCAAGAGGATTCTCAGTCAAATCATAAACTGAA
TTCCTTCTGTGCCTTTAGGAGCTTAGCAAGACATGCTGGGAACATAGGAA
TTTTTTAAAGAATGAAACACCTACAAATGATAGAAATGAATAGAATCTAT
TTAACATTCAATTTCTTCTTAAAATAATAATTTCCCATTTCATGTCTTCA
ATTCAAGAGATCTCTATAAAGATTAATGAGGGTTTCTGGAGGCTTGCACT
TCCAAGTACTTCAAAAAACAAACAAACAAACAAACAAAACCTAACAGTAG
TCAGTTATTTTTTTTTGCATTTCAAAGAATTTTTAATACATAAAAGAATA
AAACAAAACATTTAAATTAAAGATTATAAAACTAAATGTCGATAATCACA
TTTCTTGTGCCAAAGTTTAGCTAAGTCTGGGAGGAGAGGACTTGATCTCC
TCCCTATCAAAGCTCTGCTGTTTCAGTTACTTGAAAGGTTTAAGTCTTAA
AAGAGTTAATCTTTTACAGGTGATTATAACAAGCAAAGCAAACTCTTTTT
CCTTCCTTTTTTAATGAATCATATTATTCCTTTAAACTTTTTTCTTTTCT
TTTACG

Query= MSMg01no068_c12.g1 MSMg01no068_c12.g1 CHROMAT_FILE:
MSMg01no068_c12.g1 PHD_FILE: MSMg01no068_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:29 2005
         (536 letters)



>mm_chrX_87689726_87690660
          Length = 935

 Score = 1013 bits (524), Expect = 0.0
 Identities = 533/536 (99%), Gaps = 1/536 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctactgttcacattcatgtgactccagagaacaggggaatcccaagaggattctcagtca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctactgttcacattcatgtgactccagagaacaggggaatcccaagaggattctcagtca 260

                                                                       
Query: 61  aatcataaactgaattccttctgtgcctttaggagcttagcaagacatgctgggaacata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatcataaactgaattccttctgtgcctttaggagcttagcaagacatgctgggaacata 320

                                                                       
Query: 121 ggaattttttaaagaatgaaacacctacaaatgatagaaatgaatagaatctatttaaca 180
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaattttttaaagaatgaaagacctacaaatgatagaaatgaatagaatctatttaaca 380

                                                                       
Query: 181 ttcaatttcttcttaaaataataatttcccatttcatgtcttcaattcaagagatctcta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcaatttcttcttaaaataataatttcccatttcatgtcttcaattcaagagatctcta 440

                                                                       
Query: 241 taaagattaatgagggtttctggaggcttgcacttccaagtacttcaaaaaacaaacaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaagattaatgagggtttctggaggcttgcacttccaagtacttcaaaaaacaaacaaa 500

                                                                       
Query: 301 caaacaaacaaaacctaacagtagtcagttatttttttttgcatttcaaagaatttttaa 360
           ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 501 caaacaaacaaaacctaacagtagtcagtgatttttttt-gcatttcaaagaatttttaa 559

                                                                       
Query: 361 tacataaaagaataaaacaaaacatttaaattaaagattataaaactaaatgtcgataat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tacataaaagaataaaacaaaacatttaaattaaagattataaaactaaatgtcgataat 619

                                                                       
Query: 421 cacatttcttgtgccaaagtttagctaagtctgggaggagaggacttgatctcctcccta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cacatttcttgtgccaaagtttagctaagtctgggaggagaggacttgatctcctcccta 679

                                                                   
Query: 481 tcaaagctctgctgtttcagttacttgaaaggtttaagtcttaaaagagttaatct 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tcaaagctctgctgtttcagttacttgaaaggtttaagtcttaaaagagttaatct 735


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 935
Length adjustment: 10
Effective length of query: 526
Effective length of database: 925
Effective search space:   486550
Effective search space used:   486550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)