XXXXXXXXXXXXXXXXXXXXXXCTATTTCCAGAGGATCCGCGGAATTCTC
TGTTTAGCTCTTTATTCTACTTTTAATTGAGTTATCTGTGGTTTTTTTTT
TAGAGGTTAACTTTGATAGTTCTTCAATGCTAGCAAAGAATCTGAATATT
TCAGAGATACAAAAATACATATATATACAGTGAAAAGATGTAGAGAGTAA
TATCAAGTAGTGAAAATATTTAGTATTGTTTTTAAAAGGAATTATACTAG
TTATCAAAGAAAATGAATTCTGTGCTATCTGTAAAATATTGAGACCAATT
TATGTGCACAATAACTAAAAGGGATTCATGATACATTAAGTAGAGTAAGG
AAATCACAAAATATTGTAATAAATTCTGATTTTTAAAAACCATTAAATAT
ATTCATATTACCATACATTACAACTAAAACTAGCCTGAAAAAATCTAAAG
TCCCAAGTGATTATCTGCAGGACATGGATATTCAAGTTTGAGTTACTTAT
TTGAGTATTTGCAACACAATTGATCTCTGAACTTCAGAAAACAAATTTTT
GCTAAAGGCCAAACCACCACTGAATAAATTAAGCACAGTTTTTCCAAGAT
AAGAACAAAGATATTTATGTGATAATAAAAGTTAAACCAAGTCCGAGCTC
TCAGCAAGACAACGTAGCACATCTTATGCCAAAATTTTAAAACCATTACC
ATCACTATGACT

GTGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXTTCCCGTAATTCTGTTTCCACAGAATTATGGAACCTCTGATGACTCT
GCTCATGTTGTCCAGCATTTTATCTTTTTTTTTTTTTGGCTTTAGAGCTT
TACTGCACCAAGACACGAGAGAGACAGAAGGTAAAAGAAAGAGAGAGGCC
AGCCATAGCCACGGCCATGGGCACGGCCACATGCAAGAAGGGGCGAAGCG
AGGGCCAAAAAGGATAGCTAGAGACTGACAGCCATAACGGTTACAGCTCA
ATAGCTAGGATTTTTATCTTTTAGACTTTTTCCTAATTGGTCATCCTTTG
AGTTGAATTTTTTCCTACATTACCAGGCGCACCTAATTTTATCCTAGCTA
TTTATGCTCTACTATCTGATGCGCTTAAATATTGATCAATGGTATCTCGC
TTCATGCCGCATTCATACATAAGCGCCTTCGCCTTTACTCCACTAGTTCC
AGGCGCCACCCGGACCGAGCCTATCTCCTTTTCTAAGGTATAACCATCAC
GACCTACACTGGCTCACACCAAACTCTCCCCCTTGACATTACGCGACCTA
TTCCAGCAGCGCGCTTCGGGCCCTTCCCATTCCCTTTGTCCCTTACACCC
CTTGGTTTAGTTCCCGCCCCGTTCCCACCCCACCTCACCCTCAAATCTAC
TACCATACACACCGCCAACCCTCGCCCTATATCTG

Query= MSMg01no080_b23.b1 MSMg01no080_b23.b1 CHROMAT_FILE:
MSMg01no080_b23.b1 PHD_FILE: MSMg01no080_b23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:56 2005
         (518 letters)



>mm_chrX_95264065_95264985
          Length = 921

 Score =  915 bits (473), Expect = 0.0
 Identities = 501/511 (98%), Gaps = 3/511 (0%)
 Strand = Plus / Minus

                                                                       
Query: 11  gaattctctgtttagctctttattctacttttaattgagttatctgtggtttttttttta 70
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 803 gaattctctgtttagctctttattctacttttaattgagttatctgtgggttttttttta 744

                                                                       
Query: 71  gaggttaactttgatagttcttcaatgctagcaaagaatctgaatatttcagagatacaa 130
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gaggttaactttgatagttcttcaatgctagcaaagaatctgaatatttcagagatacaa 684

                                                                       
Query: 131 aaatac--atatatatacagtgaaaagatgtagagagtaatatcaagtagtgaaaatatt 188
           ||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 683 aaatacatatatatatacagtgaaaatatgtagagagtaatatcaagtagtgaaaatatt 624

                                                                       
Query: 189 tagtattgtttttaaaaggaattatactagttatcaaagaaaatgaattctgtgctatct 248
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tagtattgtttttaaaaggaattatactagttatcaaagaaaatgaattctgtgctatct 564

                                                                       
Query: 249 gtaaaatattgagaccaatttatgtgcacaataactaaaagggattcatgatacattaag 308
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 563 gtaaaatattgagaccaatttatgtgcacaataacaaaaagggattcatgatacattaag 504

                                                                       
Query: 309 tagagtaaggaaatcacaaaatattgtaataaattctgatttttaaaaaccattaaatat 368
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tagagtaaggaaatcacaaaatattgtaataaattctgatttttaaaaaccattaaatat 444

                                                                       
Query: 369 attcatattaccatacattacaactaaaactagcctgaaaaaa-tctaaagtcccaagtg 427
           ||||||||||  |||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 443 attcatattagtatacattagaactaaaactagcctgaaaaaaatctaaagtcccaagtg 384

                                                                       
Query: 428 attatctgcaggacatggatattcaagtttgagttacttatttgagtatttgcaacacaa 487
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 attatctgtaggacatggatattcaagtttgagttacttatttgagtatttgcaacacaa 324

                                          
Query: 488 ttgatctctgaacttcagaaaacaaattttt 518
           |||||||||||||||||||||||||||||||
Sbjct: 323 ttgatctctgaacttcagaaaacaaattttt 293


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 921
Length adjustment: 10
Effective length of query: 508
Effective length of database: 911
Effective search space:   462788
Effective search space used:   462788
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)