XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTGA
TCTTTCCAGACTTTTATCATGAATGGGTGTTGGATCTTGTCAAATGCTTT
CTCCTCATCTAACGAGATGATCATGTGGTTTTTGTCTTTGAGTTTGTTTA
TATAATGGATTACGTTGATTGATTTCCATTTATTAAACCATCCCTGCATC
CCTGGAATAAAACCTACTTGGTCAGGATGGATGATTGCTTTAATGTGTTC
TTGGATTTGGTTAGCAAGAATTTTATTGAGTAATTTTGCATCGATATTCA
TAAGGTATATTGTTCTGAAGTTCTCTATCTTTGTTGTATCCTTCTGTGGT
TTTTTTATCATCACCACTTTCGGCTTCTTATTACTGCTCTGGCTAAAGTA
CCTTCCCCCCTCTTTTTTTTTTTTTATTTTCCCTCTTTTCTTTACTTTAT
ATTTTCACTTAATTTCTTAACCTTCTACTCTGTACTCTAATATTATCATT
TTTTTCTAATTACATATCCCTTTGTACTATTCCTTCCTTTATTTCTCTTC
TTTTCATCGTCCATTTTTATTCTTTTATTCATTTTATTTTTCTTCTTTTA
TCTCTACTCACTATTTATTCTTCCCCACTTTTTTATCCCCACCCTCTTTT
TATTGTTATTCATTTACACTCTTTATATATATACATAATATATTTCTTCT
TATTACTTTTTTCTATATATTTCTTTTTTCTTTCTATTAATAATACGACC
ACTCATCTCTC

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCTCCCACTTTTCCAGCCAGGTAGCAAAGCAACTGA
GGATAAGGAGCAGTCTTCAGGGATAGACCTTCAGTGACCTCCCATAATGA
TCAAGTATTTCAATCATCTCCCAATAACGTCACCCTGGTGAGCAAGCCTT
AAAACCATGTTTTCTGGGGTTTCATCCTGAGCAGGAGAAGACAATGTGAT
GTTCACATACTTCTCCATGTAAATATTTACTTTATAAGTGAATAGGGACA
TTGTTTATCTTACTAAACAACTTAGTATTGGAGCTTGGTAGAAGTATCAA
GTTTGAAACACAGAAAAGTGAGGGACTTAAGAATACTGTTGAGGAGTATG
AGTGTGTTTTTATTGCATCTTCCAATATGCACTTCATGATGCACTTGCAA
AATGACACTATGACAACTTGTGGTTTATAGATGATGAAGCATAATTTCAC
AAATTTCCGTACAGCCTCATAGTTCTTTTGAAGAGAAAATGCTCATACCC
TTATTGATCTGTTTCCAAATCCCATGTCAGTTCTTAGCAGAGCAATGAAG
TATGTTATAATTCTTAATACTAAAGTACTATAATGTGAGAAGAGAATGGT
CAAATGATCACTGGGGGCTTGTCATTTATTCTTGAAATAGTCAAGCACCC
ACCTCCTTATGGTCTTGAA

Query= MSMg01no083_b19.g1 MSMg01no083_b19.g1 CHROMAT_FILE:
MSMg01no083_b19.g1 PHD_FILE: MSMg01no083_b19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:45 2005
         (652 letters)



>mm_chrX_44195320_44196370
          Length = 1051

 Score = 1191 bits (616), Expect = 0.0
 Identities = 643/652 (98%), Gaps = 1/652 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctcccacttttccagccaggtagcaaagcaactgaggataaggagcagtcttcagggata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 ctcccacttttccagccaggtagcaaagcaactgaggataaggagcagtcttcagggata 792

                                                                       
Query: 61  gaccttcagtgacctcccataatgatcaagtatttcaatcatctcccaataacgtcaccc 120
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 791 gaccttcagtgacctcccataatgatcaactatttcaatcatctcccaataacatcaccc 732

                                                                       
Query: 121 tggtgagcaagccttaaaaccatgttttctggggtttcatcctgagcaggagaagacaat 180
           ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 731 tggtgagcaagccttgaaaccatgttttctggggtttcatcctgagcaggagaagaaaat 672

                                                                       
Query: 181 gtgatgttcacatacttctccatgtaaatatttactttataagtgaatagggacattgtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 gtgatgttcacatacttctccatgtaaatatttactttataagtgaatagggacattgtt 612

                                                                       
Query: 241 tatcttactaaacaacttagtattggagcttggtagaagtatcaagtttgaaacacagaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tatcttactaaacaacttagtattggagcttggtagaagtatcaagtttgaaacacagaa 552

                                                                       
Query: 301 aagtgagggacttaagaatactgttgaggagtatgagtgtgtttttattgcatcttccaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aagtgagggacttaagaatactgttgaggagtatgagtgtgtttttattgcatcttccaa 492

                                                                       
Query: 361 tatgcacttcatgatgcacttgcaaaatgacactatgacaacttgtggtttatagatgat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tatgcacttcatgatgcacttgcaaaatgacactatgacaacttgtggtttatagatgat 432

                                                                       
Query: 421 gaagcataatttcacaaatttccgtacagcctcatagttcttttgaagagaaaatgctca 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 431 gaagcataatttcacaaatttccgtacagcctcatagttcttttgaagagaaaatgttca 372

                                                                       
Query: 481 tacccttattgatctgtttccaaatcccatgtcagttcttagcagagcaatgaagtatgt 540
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 371 tacccttattgatctgtttccaaattccatgtcagttcttagcagagcaatgaagtatgt 312

                                                                       
Query: 541 tataattcttaatactaaagtactataatgtgagaagagaatggtcaaatgatcactggg 600
           |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tatatttcttaatactagagtactataatgtgagaagagaatggtcaaatgatcactggg 252

                                                               
Query: 601 ggcttgtcatttattcttgaaatagtcaagcacccacctccttatggtcttg 652
           |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 251 ggcttgtcatttattcttgaaatagtcaagcaccca-ctccttatggtcttg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1051
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1041
Effective search space:   668322
Effective search space used:   668322
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)