ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCCAGACTTCCAAAGAAGACCTGATACCAATATTCCTCAAACTGTTTC
ATAAAATAGAAACAGAAGGAACACTACCTAATTCATTCTATGAAGCCACA
ATTATTCTGATATATAAACCACACAAGGACCCAATCAAAAAAGAGTACTT
TAGACCAATCTCACTTATGAATATCAATGGAAAAATACTCAATAAAATTT
TGTGCAAACTGAATACAAGAACACCATCATTAAAACCATCATCCACCAAG
ATCAGTTAGGCTTCATCCCAGGGATGCAAGGTTGGTTCAATATACAAAAA
TCTATTAATATAATCCACTATATCCACTATATAAAAAACTCAAAGGAAAA
AAAATCACATAATCAACTCCTTAGATGCAGAAAAAACATTTGACAAAATA
CAATAGCATTTCATGTTAAAAGTACCAGAGAGGTCAGGAATTCAAGGCCC
ATATCTAAACATAATAAAAGCAATTTACTGCAAACTCACAGCCAATATAA
AATTAAATGGATAGGTACTTGAAGCAATCACACTAAAATTAGGGACAAGA
CAAGGATGCCCACTTCCCCCATATCTATACAATATAATACTTGAAGTACC
AGCTAGAACAATATGAAAACAAAAGGAGATCAAGGGGATACAAATAGACN
AAGAANAATAAATGTAAT

GATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCCCTCCTACAATCTATAAGACTTACAAAGTGT
TTGATGTCAGAAGGGCACTGTTGTCTGCAAGCATGAGCTTCTCTGTATTT
TATGAGCTAAGTCTGAAGTCCCTGACATTTAGAAATGACAATGTGTCAGG
GTGAGGTTCCTTCACATAATCTTCCTAAGTTTTATCAGCTTTGTGAAATG
TTACAAAGGGCCTTTATTCAGTATATAAAATGTTTTAACTATTGAGAATT
TTATGCTGTCCAGAAGGAAAAAGGTCCTTAATGAAGATTAGTCAAAGATA
GTTCAGTAACGCTTTTTTGCACTAATGATGTTCTTTGAAGGTTTGGGGTA
CAAATAAAAGATTCTTTAGTTGCTTTTATTTTATACTCAATGTTCATAAC
CTTTTAACATTTTTTTTGTATGAGGTACTTTTGAATTACCCCTGGGAATG
AAGGAAAACTGTAGGAAGTCTTTCATTGGTAGTAGACATTTAATTGAAAT
ATTGAAAAATTAACTTGTTGGCTTTAATGCATTTTATATTAAACGTTTAT
GTAATAAAAAATAATAGCTTAGAATCTAAGAATACCAAAATAATTTAATT
GTTAATGACTTTATATAATATATCTTTATGTGTTCAGTGTGGTTAAGATT
ATTGGCTCCAT

Query= MSMg01no087_a22.g1 MSMg01no087_a22.g1 CHROMAT_FILE:
MSMg01no087_a22.g1 PHD_FILE: MSMg01no087_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:02 2005
         (643 letters)



>mm_chrX_84144831_84145872
          Length = 1042

 Score = 1181 bits (611), Expect = 0.0
 Identities = 635/643 (98%), Gaps = 1/643 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccctcctacaatctataagacttacaaagtgtttgatgtcagaagggcactgttgtctgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 ccctcctacaatctataagacttacaaagtgtttgatgtcagaagggcactgttgtctgc 783

                                                                       
Query: 61  aagcatgagcttctctgtattttatgagctaagtctgaagtccctgacatttagaaatga 120
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 782 aagcatgagcttctctgtattttatgagctatgtctgaagtccctgacatttagaaatga 723

                                                                       
Query: 121 caatgtgtcagggtgaggttccttcacataatcttcctaagttttatcagctttgtgaaa 180
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gaatgtgtcagggtgaggttccttcacataatcttcctaagttttatcagctttgtgaaa 663

                                                                       
Query: 181 tgttacaaagggcctttattcagtatataaaatgttttaactattgagaattttatgctg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tgttacaaagggcctttattcagtatataaaatgttttaactattgagaattttatgctg 603

                                                                       
Query: 241 tccagaaggaaaaaggtccttaatgaagattagtcaaagatagttcagtaacgctttttt 300
           |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 602 tccagaaggaaaaaagtccttaatgaagattagtcaaagatagttcagtaatgctttttt 543

                                                                       
Query: 301 gcactaatgatgttctttgaaggtttggggtacaaataaaagattctttagttgctttta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gcactaatgatgttctttgaaggtttggggtacaaataaaagattctttagttgctttta 483

                                                                       
Query: 361 ttttatactcaatgttcataaccttttaacattttttttgtatgaggtacttttgaatta 420
           |||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 482 ttttatactcaacgttcataaccttttaacattttttt-gtatgaggtacgtttgaatta 424

                                                                       
Query: 421 cccctgggaatgaaggaaaactgtaggaagtctttcattggtagtagacatttaattgaa 480
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 423 cccctgggaatgaaggaaaactgtaggaagtttttcattggtagtagacatttaattgaa 364

                                                                       
Query: 481 atattgaaaaattaacttgttggctttaatgcattttatattaaacgtttatgtaataaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 atattgaaaaattaacttgttggctttaatgcattttatattaaacgtttatgtaataaa 304

                                                                       
Query: 541 aaataatagcttagaatctaagaataccaaaataatttaattgttaatgactttatataa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aaataatagcttagaatctaagaataccaaaataatttaattgttaatgactttatataa 244

                                                      
Query: 601 tatatctttatgtgttcagtgtggttaagattattggctccat 643
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tatatctttatgtgttcagtgtggttaagattattggctccat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1042
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1032
Effective search space:   653256
Effective search space used:   653256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)