TATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTACCTACATACCCCCATATAAAAGGAAAACTTAATTTAGTTCC
AGATTCCTTATGTGATATACACTTATTTTCAATATAGATTAAAATTACTT
CATAATCCTTACCCATCTTTACCAAGAAGATTAGAACATTTTTCTAGAAA
ACATTCTATCACAATGTGTTGGAGAGGACCTCTCTGACTGATCACCCTGA
ACTCCTCAGACATCTGGTCGACCTTAATTTCCCATTGCTACTTTTGAACT
GATATTATGAAAAGGTAGACAAATATACAGAAAAAATTATACTCTTATGG
ACATCTTATCCACTCCATTTCTGCCGAAAATATTTTTCTACAACAACATA
TCATCAAATCCTAAACATTTATTTACTCTGATCTTTGTATCCTTCCATGG
TTTCGATTTTTTCCAATAGACATGATCCAAACCAGCAATTCTAGACCTTT
TCATACAATCCTAATAGTAGAGCCAACCAATTGATAGTACATAACATTTT
GTTTTTCATTTCAAGAATAATGCTTGCCCCTTGCAGACCAAACTTGCAAT
TATAACAATGCCCTGTATGTTGTTGCTTCTCTTGGAAATTTCATTTTCTA
TTTTTAGAATTGGCAGTTCTCTTAACAATTACAGTACAAGTCTTCTCACA
TTCCTTCCAGAAAAAGAAATGATCC

NCCATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTTGGAAGGCTTTGATTTTTTTATTTCTTCC
ATGACCTATGGCATTCAGTAGAGCGTTGTTCAATTCCATGAGTTTATAGG
CTTTCTGTTGTTGAAATCGCGCTTTAATCCATTATGGTCTGATAACATAG
AGGAGGTTATTACAAATTTCTTATATGTCTTGAGACTTGATTTGTGATCA
AGTATACTGGCTGGTTTTGTGTTTCAACCTGACACAGACTGGAGTTATCA
CAGAGAAAAGAGCTTCAGCTGGGGAAGTGCCTCCATAAAATCCAGCTGTG
GGCATTTTCTCAGTTGGTGATCAAGTGGGGGAAGGTCCATTGTGGTTGGT
GCCTTCCTTGGGCTGGTAGTCCTGGGTCTAAAAGAAAGCAAGCTGAGCAA
GCCAGTGGAAGCAAGCCAGTAAGTAATATCCCTCCATGGCCTCGGGATCC
AGCTCTTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTG
ATTAACAGCAGTATAGCTGTATAAACCCTTTCCTCTCCAGCTTGCTTCTT
GATCATGATGTTTTATCCAGGATTAAAAACCCTGACTAAGACACCAAGTA
TGTGGTCAAATTTTGAGAATATTCTATGAGATGGTGAGAAGAGAGAATGT
TATTATTGAATATTTTAAGG

Query= MSMg01no090_l19.b1 MSMg01no090_l19.b1 CHROMAT_FILE:
MSMg01no090_l19.b1 PHD_FILE: MSMg01no090_l19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:59 2005
         (472 letters)



>mm_chrX_152615065_152615936
          Length = 872

 Score =  882 bits (456), Expect = 0.0
 Identities = 465/468 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctacctacatacccccatataaaaggaaaacttaatttagttccagattccttat 64
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gaattctacctacatacctccatataaaaggaaaacttaatttagttccagattccttat 613

                                                                       
Query: 65  gtgatatacacttattttcaatatagattaaaattacttcataatccttacccatcttta 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gtgatatacacttattttcaatatagattaaaattacttcataatccttacccatcttta 553

                                                                       
Query: 125 ccaagaagattagaacatttttctagaaaacattctatcacaatgtgttggagaggacct 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ccaagaagattagaacatttttctagaaaacattctatcacaatgtgttggagaggacct 493

                                                                       
Query: 185 ctctgactgatcaccctgaactcctcagacatctggtcgaccttaatttcccattgctac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ctctgactgatcaccctgaactcctcagacatctggtcgaccttaatttcccattgctac 433

                                                                       
Query: 245 ttttgaactgatattatgaaaaggtagacaaatatacagaaaaaattatactcttatgga 304
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 432 ttttgaactgatattatgaaaaggtagacaaatatacagagaaaattatactcttatgga 373

                                                                       
Query: 305 catcttatccactccatttctgccgaaaatatttttctacaacaacatatcatcaaatcc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 catcttatccactccatttctgccgaaaatatttttctacaacaacatatcatcaaatcc 313

                                                                       
Query: 365 taaacatttatttactctgatctttgtatccttccatggtttcgattttttccaatagac 424
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tgaacatttatttactctgatctttgtatccttccatggtttcgattttttccaatagac 253

                                                           
Query: 425 atgatccaaaccagcaattctagaccttttcatacaatcctaatagta 472
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 atgatccaaaccagcaattctagaccttttcatacaatcctaatagta 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space:   398244
Effective search space used:   398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)