Query= MSMg01no093_f19.b1 MSMg01no093_f19.b1 CHROMAT_FILE:
MSMg01no093_f19.b1 PHD_FILE: MSMg01no093_f19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:53 2005
(264 letters)
>mm_chrX_40244423_40245084
Length = 662
Score = 482 bits (249), Expect = e-140
Identities = 259/263 (98%), Gaps = 2/263 (0%)
Strand = Plus / Minus
Query: 1 ccagaatccatctgacatgtaacactgcaaaagttcagggagaaatggatatgggggtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ccagaatccatctgacatgtaacactgcaaaagttcagggagaaatggatatgggggtgt 402
Query: 61 aactttcttttataagcaagtcattaatgattttcaaatgtgcagagcaattgcagtctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 aactttcttttataagcaagtcattaatgattttcaaatgtgcagagcaattgcagtctt 342
Query: 121 ctcattaattgtatgaattaaaaagatatttatttactttatatctcaatcacagctttt 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 341 ctcattaattgtatgaattaaaacgatatttatttactttatatctcaatcacagctttt 282
Query: 181 cctcactcctctccttccagtccatccctctcaccgccgcccccccccccattctcccct 240
||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 281 cctcactcctctccttccagtccatccctctcaccaccgccccccccc--attctcccct 224
Query: 241 tccattctctgaagaaaaacaga 263
|||||||||||||||||||||||
Sbjct: 223 tccattctctgaagaaaaacaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 264
Length of database: 662
Length adjustment: 9
Effective length of query: 255
Effective length of database: 653
Effective search space: 166515
Effective search space used: 166515
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no093_f19.g1 MSMg01no093_f19.g1 CHROMAT_FILE:
MSMg01no093_f19.g1 PHD_FILE: MSMg01no093_f19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:53 2005
(280 letters)
>mm_chrX_40139591_40140270
Length = 680
Score = 520 bits (269), Expect = e-152
Identities = 275/277 (99%)
Strand = Plus / Plus
Query: 1 tttaaagtatccttctggtgttgaatgagaagtcttatttgatatactgttgctatagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaaagtatccttctggtgttgaatgagaagtcttatttgatatactgttgctatagaa 260
Query: 61 agatactgaccaaagtaatagtgtgaggtgaatggggttaaaccattttctatttgagtt 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 agatactgaccaaagtaatagtgtgaggcgaatggggttaaaccattttctatttgagtt 320
Query: 121 tttgcaccagaatctgcaaaggctaggtgcggccttctgcaacccaattacatgtacaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgcaccagaatctgcaaaggctaggtgcggccttctgcaacccaattacatgtacaag 380
Query: 181 gaatgcagtctgacacaaaacactttcttgatagaccagtatgtggagtcttaatattat 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 gaatgcagtctgacacaaaacactttcctgatagaccagtatgtggagtcttaatattat 440
Query: 241 ctacaaaattagccatgatatatatcattgcacctaa 277
|||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctacaaaattagccatgatatatatcattgcacctaa 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
