CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTGGCAAAGCATCACCCTCACAGTAGACAGAGCTCAGTTACAATCTC
AGATGTCCTTGTGGAGTGACCTTGGCCAAGTTACTTTGTGAAGCCATGTC
TCCTCATCTCTAAAGCCCTAGACTTTCACCATTTTAGGTTCTGGAGGTCA
GTGCCTGTTAAGTGCACTTTCTTGGTGAAAATACTTGAAGAAGGAATACA
CACAGAGACACTCGTGTGCAGTGGGGGTAAAGAGGGGACATACGCATCAA
GAGGATTGGGGTTGGGTTAGCTGATGAGCAACTCTGTGCACATTAACAGT
AAGAGATGGTAGCCCAGAGAGCTCCCATATTAACTAATTAACTGACGAGG
GGCCAATAGAAGGACACAGCTCTTCGCTCACTAAGGATCCTCTGGAGGCA
GGGTGATGGGGTACCTACTTAGACAAGAGAAAACAGGAGATGGATTTCCT
GGTCTTCTGAAGTCTCTGGCATGTCACCCACTCACCAAGTGTCATAGTGA
ACATTGGCAAGAAACATCAGGTTTGTATGCAAGCTTGCTCTGGGCATATG
CCCTCAAGGGCACAGTATGGATTCAAGTTTAGCTCGCTGGCGCCAGGCTG
GACCCCCATTGCTCTCTTGAAGTCCTCACA

CAATACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXATCTTGCTCTTTTTCTTCTAATGATTAC
GATGTGGACTGTTTTGATATGCTTCCTCTTTTCTAATATAAGCATTCAGT
GCTATAAATTTCCCTCTCAACACCGTTTTGACTGCACTACATGGATCGTT
ATTTGTTATATTTCATTCTCCTTCACTTCGTGTCCCTGTGTGCCAGAGTC
AACATTTCCCCACTTCATGAGACACGTGAAAACCATATTTCTTTCAGGTC
TCACTATACACCCCCTTTCTAAGACACATTCCCTCTACTTACATTGAGAG
CTGTATTAGACGTTGTTATAATTTTGCATTGACTGCCGAATGTAATTCAA
AATTTCAAGAAAAGGGAAGGAAAGTAGTTTTATCCAATTTTAAAACGTTT
TTCCCAGCATACTTTCTTATTTCCTGATCTCTTGATATGCTTCCTCTTTT
AATTTTATGACACTCCTGATCCTTTAGACACTCCTTTATCTGTAGGCCTA
TTGCTATCAAATACTCTTGGTATGTCTTCATCTGAAAATGCCATCGTTCC
TGCATGACGTTTCCTCTCGACACAGTTCTTTCAGCCCTGAAAATATTATG
CCTGTTGCTTCTGGCATTCGTATTTCCAGATGAAACATA

Query= MSMg01no094_m01.b1 MSMg01no094_m01.b1 CHROMAT_FILE:
MSMg01no094_m01.b1 PHD_FILE: MSMg01no094_m01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:32 2005
         (565 letters)



>mm_chrX_96557738_96558702
          Length = 965

 Score = 1054 bits (545), Expect = 0.0
 Identities = 557/561 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttggcaaagcatcaccctcacagtagacagagctcagttacaatctcagatgtc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 765 gaattcttggcaaagcatcaccctcacagtagacagagctcagttacaacctcagatgtc 706

                                                                       
Query: 65  cttgtggagtgaccttggccaagttactttgtgaagccatgtctcctcatctctaaagcc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 cttgtggagtgaccttggccaagttactttgtgaagccatgtctcctcatctctaaagcc 646

                                                                       
Query: 125 ctagactttcaccattttaggttctggaggtcagtgcctgttaagtgcactttcttggtg 184
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 645 ctagactttcaccattttaggttctggaggtcagtacctgttaagtgcactttcttggtg 586

                                                                       
Query: 185 aaaatacttgaagaaggaatacacacagagacactcgtgtgcagtgggggtaaagagggg 244
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 585 aaaatacttgaagaaggaatacacacagagacactcgtgtgtagtgggggtaaagagggg 526

                                                                       
Query: 245 acatacgcatcaagaggattggggttgggttagctgatgagcaactctgtgcacattaac 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 acatacgcatcaagaggattggggttgggttagctgatgagcaactctgtgcacattaac 466

                                                                       
Query: 305 agtaagagatggtagcccagagagctcccatattaactaattaactgacgaggggccaat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 agtaagagatggtagcccagagagctcccatattaactaattaactgacgaggggccaat 406

                                                                       
Query: 365 agaaggacacagctcttcgctcactaaggatcctctggaggcagggtgatggggtaccta 424
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 agaaggacacggctcttcgctcactaaggatcctctggaggcagggtgatggggtaccta 346

                                                                       
Query: 425 cttagacaagagaaaacaggagatggatttcctggtcttctgaagtctctggcatgtcac 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 cttagacaagagaaaacaggagatggatttcctggtcttctgaagtctctggcatgtcac 286

                                                                       
Query: 485 ccactcaccaagtgtcatagtgaacattggcaagaaacatcaggtttgtatgcaagcttg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ccactcaccaagtgtcatagtgaacattggcaagaaacatcaggtttgtatgcaagcttg 226

                                
Query: 545 ctctgggcatatgccctcaag 565
           |||||||||||||||||||||
Sbjct: 225 ctctgggcatatgccctcaag 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space:   530025
Effective search space used:   530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)