Query= MSMg01no099_l12.b1 MSMg01no099_l12.b1 CHROMAT_FILE:
MSMg01no099_l12.b1 PHD_FILE: MSMg01no099_l12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:19 2005
(602 letters)
>mm_chrX_112889938_112890938
Length = 1001
Score = 1149 bits (594), Expect = 0.0
Identities = 600/602 (99%), Gaps = 1/602 (0%)
Strand = Plus / Plus
Query: 1 agttgggaattacccccaccagggttcttcctctgcttgattggagaccagactgtctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agttgggaattacccccaccagggttcttcctctgcttgattggagaccagactgtctgt 260
Query: 61 gcatagcccattgccccacaataaaggtgaaacttgtggtcaatatttaaatttaaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcatagcccattgccccacaataaaggtgaaacttgtggtcaatatttaaatttaaataa 320
Query: 121 gcaggacacaagaaccctatgtattattagaatctacaaataaaattgaacttgaaatga 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 gcaggacacaagaaccctatgtattattagaatctacaaataaaattgaacttgaattga 380
Query: 181 aagtagcaagtctacctgagaacaggaaggtaaagggaggcttaaaaaatgtaagtaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtagcaagtctacctgagaacaggaaggtaaagggaggcttaaaaaatgtaagtaggg 440
Query: 241 agaaaagaagaaaatatataagacaaatatgttataaatacattttgcccatttatgaaa 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaaagaagaaaatata-aagacaaatatgttataaatacattttgcccatttatgaaa 499
Query: 301 attttataatgaagcacattattttgtacaattgcaaacattatatttaaaagcataaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 attttataatgaagcacattattttgtacaattgcaaacattatatttaaaagcataaat 559
Query: 361 actccaaattttaatggtttagtaaaattgtacatcaatatatttaaaactgtacaacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 actccaaattttaatggtttagtaaaattgtacatcaatatatttaaaactgtacaacat 619
Query: 421 acactttttactaccaagaatatatttctgaaattttacctagctactttgaatgacaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 acactttttactaccaagaatatatttctgaaattttacctagctactttgaatgacaaa 679
Query: 481 acagctttaatagtcatggtaataagcactaaaagagttttattaaaaaatgatatgatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 acagctttaatagtcatggtaataagcactaaaagagttttattaaaaaatgatatgatt 739
Query: 541 ttgaagatgtttccatgactctaatgattgttactttatattcatgatttctagtatcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ttgaagatgtttccatgactctaatgattgttactttatattcatgatttctagtatcat 799
Query: 601 ac 602
||
Sbjct: 800 ac 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1001
Length adjustment: 10
Effective length of query: 592
Effective length of database: 991
Effective search space: 586672
Effective search space used: 586672
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no099_l12.g1 MSMg01no099_l12.g1 CHROMAT_FILE:
MSMg01no099_l12.g1 PHD_FILE: MSMg01no099_l12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:20 2005
(464 letters)
>mm_chrX_113045358_113046221
Length = 864
Score = 882 bits (456), Expect = 0.0
Identities = 462/464 (99%)
Strand = Plus / Minus
Query: 1 aaagctacttgtaaaatgaagtcacttgggactagtcacaatctaaaacaacaacataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 aaagctacttgtaaaatgaagtcacttgggactagtcacaatctaaaacaacaacataaa 605
Query: 61 aataaaacaaaacattgttttatgtaatattgcattatttagggaaaggcatggcaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 aataaaacaaaacattgttttatgtaatattgcattatttagggaaaggcatggcaagaa 545
Query: 121 atgaacatatccaatagattttaattcaatgtgagtccaatattgtatgcaaaacacagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 atgaacatatccaatagattttaattcaatgtgagtccaatattgtatgcaaaacacagt 485
Query: 181 gcctatcacataaataaacctttaataaattatttttgagtgaacaaataaaattatgta 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gcctgtcacataaataaacctttaataaattatttttgagtgaacaaataaaattatgta 425
Query: 241 aagcaaatatttgtggtttctaataataacccatattagtgcagcaagatattttcaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 aagcaaatatttgtggtttctaataataacccatattagtgcagcaagatattttcaagg 365
Query: 301 aaaagtcagaactctggcatctctggtagggtagacttaggttctatcccaatttgccag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aaaagtcagaactctggcatctctggtagggtagacttaggttctatcccaatttgccag 305
Query: 361 ttaaagagatggggaactgtgtggaatatagagagaagatttatttagtgtggaacagat 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 304 ttaaagagatggggaactgtgtggaatagagagagaagatttatttagtgtggaacagat 245
Query: 421 taaaaacccagttttcccaggaccatcttcaggatactgacaaa 464
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 taaaaacccagttttcccaggaccatcttcaggatactgacaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
