XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TCTGAAGTTCTTATGTGCATAGTTTAGTGACTCAAATATTAAAGTAAAGA
TAGTAAGTTTTGTAATATATTTATTTAATTTTTTTGCATGTGGGAATCAT
TTGTAATGAGTTCAACTGAACCCTGCAAATATATTGTGCACCTACCATGC
CTATTCTTTCGACTTAGTTTTCAGATAGAAGAAGGCATGACTTTAAAGTG
TTCAGTAACAAAACAAGTCGAAGAGAAGAGAGAATCATAGGAAGAAAGAA
GTTCTTCCGGGTTCAAGTTAAGCAGCAAGCAAAGGAGTTAACACTGAAAA
TCCCGGTGCATCATCTTATCCTCAAACTAATCATCAATGAAAGGCAATGG
GAAACTTCAAAGAGAATAGCACACCAGTTCTCTCCAATTAAAGTAATCTA
CTCAAATTGACCCAAACCAGATATTTCCTTTAATTTAAAAAATTATAATG
CCTATTCACTTTAATCTTCTAGCCGGATAATGAAATCAGAGTTACTGCCA
CTAATAAGACTGACATTACCAAGCCTGCACCAAAGCAGCATTTTGATGAT
GTAGTAACAATCACACAAAGTAATTCTCCAGATGTTTCAAGAAAGACCAG
CACCTCACTTGTTACCAAAGAACACTGATTTAATTTTTTTCCAAATTAAA
AAAAAACTGTAAGGCTA

ATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCAC
CTGAAAAAATGCTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAAC
AACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATT
CAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTC
CATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAGATCAGTCTG
GCGGTTCCTCAGAAAACTGGATATAGTACTACCGGAGGATCCAGCAATAC
CTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACA
TGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAA
GGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAGATGTGGTACA
TCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAA
TTCCTGGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAAC
ACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATT
AGCCCAAAACCTAAGATACCCAAGATATAAGATACAATTTCCTAAACACA
TGACACTCAAGA

Query= MSMg01no108_i18.b1 MSMg01no108_i18.b1 CHROMAT_FILE:
MSMg01no108_i18.b1 PHD_FILE: MSMg01no108_i18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:27 2005
         (677 letters)



>mm_chrX_104818203_104819282
          Length = 1080

 Score = 1257 bits (650), Expect = 0.0
 Identities = 669/676 (98%), Gaps = 3/676 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctgaagttcttatgtgcatagtttagtgactcaaatattaaagtaaagatagt 64
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 205 gaattctctgaagttcttatgtgcatagtttagtgattcaaatattaaagtaaagatagt 264

                                                                       
Query: 65  aagttttgtaatatatttatttaatttttttgcatgtgggaatcatttgtaatgagttca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagttttgtaatatatttatttaatttttttgcatgtgggaatcatttgtaatgagttca 324

                                                                       
Query: 125 actgaaccctgcaaatatattgtgcacctaccatgcctattctttcgacttagttttcag 184
           |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actgaaccctacaaatacattgtgcacctaccatgcctattctttcgacttagttttcag 384

                                                                       
Query: 185 atagaagaaggcatgactttaaagtgttcagtaacaaaacaagtcgaagagaagagagaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atagaagaaggcatgactttaaagtgttcagtaacaaaacaagtcgaagagaagagagaa 444

                                                                       
Query: 245 tcataggaagaaagaagttcttccgggttcaagttaagcagcaagcaaaggagttaacac 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcataggaagaaagaagttcttccgggttcaagttaagcagcaagcaaaggagttaacac 504

                                                                       
Query: 305 tgaaaatcccggtgcatcatcttatcctcaaactaatcatcaatgaaaggcaatgggaaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgaaaatcccggtgcatcatcttatcctcaaactaatcatcaatgaaaggcaatgggaaa 564

                                                                       
Query: 365 cttcaaagagaatagcacaccagttctctccaattaaagtaatctactcaaattgaccca 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cttcaaagagaatagcacaccagttctctccaattaaagtaatctactcaaattgaccca 624

                                                                       
Query: 425 aaccagatatttcctttaatttaaaaaattataatgcctattcactttaatcttctagcc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaccagatatttcctttaatttaaaaaattataatgcctattcactttaatcttctagcc 684

                                                                       
Query: 485 ggataatgaaatcagagttactgccactaataagactgacattaccaagcctgcaccaaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggataatgaaatcagagttactgccactaataagactgacattaccaagcctgcaccaaa 744

                                                                       
Query: 545 gcagcattttgatgatgtagtaacaatcacacaaagtaattctccagatgtttcaagaaa 604
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 745 gcagcattttgatgatgtagtaacaatcatacaaagtaattctccagatgtttcaagaaa 804

                                                                       
Query: 605 gaccagcacctcacttgttaccaaagaacactgatttaattttttt-ccaaattaaaaaa 663
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 805 gaccagcacctcacttgttaccaaagaacactgatttaattttttttccaaattaaaaaa 864

                           
Query: 664 aaa--ctgtaaggcta 677
           |||  |||||||||||
Sbjct: 865 aaaaactgtaaggcta 880


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1080
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1070
Effective search space:   713690
Effective search space used:   713690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)