CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGTGCCCCACCTTTTTTTATTTTATTTTCCATTTTTTATTAGG
TATTTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATATCC
ACCCACCCCCACTCCCCTGCCCACCCACTCCCCCTTTTTGGCCCTGGTGT
TCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTT
CCAGTGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGTCA
AGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTT
GCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGGAG
CCCTATGATCCATCCATTACCTGACTGTGATCATCCACTTCTGTGTTTGC
TAGGCCCCGGCATACTCTCCCAATAGACAGCTACATCTGGGTCCTTTTAA
TAAAATCTTGCTAGTGTATGCAACGGTGTCCGCGCTTGCACGCTGATTAT
GGGGTGGATTCCTGTCAATGGCAGTCCCTACATGGTCCATCCTTTTGTCT
CAACTCCAAACTTTGTCTCTGTAACTCCTCCCCCGGCCGTCTTGTTCCAT
ACCCAAAGCAGGTCATAGTGCCCACACCTCAACCTTCACTCTTCTTTACT
TCCATGTGTTTAGC

ATATTATCCCTTCCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTGCTTGTAAT
AGCTGATGCTACACTATGTCCACAGCAGCCTTACTTACAACAGCTAGAAG
CTGGCAAGAATCAGCATGTCCTTCAACTGAGGAATGGATACAGAAAATGT
GGTAAATTTATGCAATGGAGAACTTTCCAGTACTTAAAGCCATGAAATTG
TTTACATATAAGTGACTAAAAATGACGTTTTATGTTACATATATTTTACT
TCAATAATTTTTCTTTAAGGAATGTTTTATGAATTTTCTATATATATTAG
TGATGGATTTATAAGTTATATATTATGAATTTCAATTAATGAGATATTTT
TACTTGACAATTTATCATTTGAATACATATATTCCCAAGATATATTCAAA
GATACTTTTGATGCTTTTAGCAACTTGATTGAAAAAAAACATTTTATTTT
ACTCTAGAAATAATTATATAATCTTTTCAAAATAGTATAAATATATTGAA
GACATTTTATTCATAATTTTTATTAGGAAAGGTGATAACATTCTAATTTC
ATTGATTGTATATAGGCAGTACTTAGACTTGTTTAGATTCCTTAAAATTT
TTATCTTTGTATTTCTGCATCAGAAACTTTGTCACCTATATGTAATATTT
TACTTTATTTTATTAAAACCAATAAAATGTT

Query= MSMg01no110_a23.g1 MSMg01no110_a23.g1 CHROMAT_FILE:
MSMg01no110_a23.g1 PHD_FILE: MSMg01no110_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:30 2005
         (584 letters)



>mm_chrX_80807673_80808657
          Length = 985

 Score = 1093 bits (565), Expect = 0.0
 Identities = 580/585 (99%), Gaps = 1/585 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   attgcttgtaatagctgatgctacactatgtccacagcagccttacttacaacagctaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 attgcttgtaatagctgatgctacactatgtccacagcagccttacttataacagctaga 260

                                                                       
Query: 61  agctggcaagaatcagcatgtccttcaactgaggaatggatacagaaaatgtggtaaatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agctggcaagaatcagcatgtccttcaactgaggaatggatacagaaaatgtggtaaatt 320

                                                                       
Query: 121 tatgcaatggagaactttccagtacttaaagccatgaaattgtttacatataagtgacta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatgcaatggagaactttccagtacttaaagccatgaaattgtttacatataagtgacta 380

                                                                       
Query: 181 aaaatgacgttttatgttacatatattttacttcaataatttttctttaaggaatgtttt 240
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaatgacgttttatgttacatatgttttacttcaataatttttctttaaggaatgtttt 440

                                                                       
Query: 241 atgaattttctatatatattagtgatggatttataagttatatattatgaatttcaatta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgaattttctatatatattagtgatggatttataagttatatattatgaatttcaatta 500

                                                                       
Query: 301 atgagatatttttacttgacaatttatcatttgaatacatatattcccaagatatattca 360
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 atgagatatttttacttgacaatttattatttgaatacatatattcccaagatatattca 560

                                                                       
Query: 361 aagatacttttgatgcttttagcaacttgattgaaaaaaaa-cattttattttactctag 419
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 aagatacttttgatgcttttagcaacttgattgaaaaaaaaacattttattttactctag 620

                                                                       
Query: 420 aaataattatataatcttttcaaaatagtataaatatattgaagacattttattcataat 479
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 621 aaataattatataatcttttcaaaatagaataaatatattgaagacattttattcataat 680

                                                                       
Query: 480 ttttattaggaaaggtgataacattctaatttcattgattgtatataggcagtacttaga 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttttattaggaaaggtgataacattctaatttcattgattgtatataggcagtacttaga 740

                                                        
Query: 540 cttgtttagattccttaaaatttttatctttgtatttctgcatca 584
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cttgtttagattccttaaaatttttatctttgtatttctgcatca 785


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 985
Length adjustment: 10
Effective length of query: 574
Effective length of database: 975
Effective search space:   559650
Effective search space used:   559650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)