Query= MSMg01no111_k08.b1 MSMg01no111_k08.b1 CHROMAT_FILE:
MSMg01no111_k08.b1 PHD_FILE: MSMg01no111_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:16:14 2005
(770 letters)
>mm_chrX_64550639_64551808
Length = 1170
Score = 837 bits (433), Expect = 0.0
Identities = 442/445 (99%)
Strand = Plus / Minus
Query: 326 aaaagtattggagagaccaggcattcaaggcccatacctaaacttaataaaagcaattta 385
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1170 aaaagtgttggagagaccaggcattcaaggcccatacctaaacttaataaaagcaattta 1111
Query: 386 ctacaagccaacagccaatatcaaattaaatggagacatacttgaagcaatcccactgaa 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1110 ctacaagccaacagccaatatcaaattaaatggagacatacttgaagcaatcccactgaa 1051
Query: 446 atcggggacaagacaaggatgcccactctccccatatctattcaatatagtactcgaagt 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1050 atcggggacaagacaaggatgcccactctccccatatctattcaatatagtactcgaagt 991
Query: 506 gttagctagaatactaagaccttaaatcctcattgtaactggctatctgcaaaggacctt 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 990 gttagctagaatactaagaccttaaatcctcattgtaactggctatctgcaaaggacctt 931
Query: 566 tataagactgggccccttaacatttcatcatggattgaggaggggttcaagaagcctttc 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930 tataagactgggccccttaacatttcatcatggattgaggaggggttcaagaagcctttc 871
Query: 626 tcctatctgagaaactatttacaataacagttattgtggaataagttgccattttcttca 685
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 870 tcctatctgagaaactatttacaatgacagttattgtggaataagttgccattttcttca 811
Query: 686 gtagcatagccactgataatttactattagtagcaaataacctcccattcatgttcaggc 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 gtagcatagccactgataatttactattagtagcaaataacctcccattcatgttcaggc 751
Query: 746 aagacattctaaattttatgggtca 770
|||| ||||||||||||||||||||
Sbjct: 750 aagaaattctaaattttatgggtca 726
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 770
Length of database: 1170
Length adjustment: 10
Effective length of query: 760
Effective length of database: 1160
Effective search space: 881600
Effective search space used: 881600
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no111_k08.g1 MSMg01no111_k08.g1 CHROMAT_FILE:
MSMg01no111_k08.g1 PHD_FILE: MSMg01no111_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:16:14 2005
(394 letters)
>mm_chrX_64424132_64424925
Length = 794
Score = 719 bits (372), Expect = 0.0
Identities = 384/390 (98%), Gaps = 4/390 (1%)
Strand = Plus / Plus
Query: 5 tttgatatttgtggagacatagaaactttatgtatttctatatgtccatacatagtgaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tttgatatttgtggagacatagaaactttatgtatttctatatgtccatacatagtgaaa 264
Query: 65 taaatcatgttttcatcaaatcttactatctttaaaattgctgtctgtaaggctataaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taaatcatgttttcatcaaatcttactatctttaaaattgctgtctgtaaggctataaaa 324
Query: 125 cctcttcatattttgtggatttttgagctcactgtgagcttatttcacctctatcattat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cctcttcatattttgtggatttttgagctcactgtgagcttatttcacctctatcattat 384
Query: 185 gcaatgtgaatttactaatttcttaaagaaatatttcctattgagctgcaaaccctatac 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcaatgtgaatttactaatttcttaaagaaatatttcctattgagctgcaaaccctataa 444
Query: 245 ttgttctgtttgggaatggttttgattctttggaatatttgactttttgcctacttatca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgttctgtttgggaatggttttgattctttggaatatttgactttttgcctacttatca 504
Query: 305 atttttgtttgaattcatagatcatgacttttttcatactatgtgtgtgtgtatgtgtgt 364
|||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 505 atttttgtttgaattcatagatcatgacttttttcatactatgtgtgtgtgt----gtat 560
Query: 365 gtgtgtgtgtgtgtgtgtgagagagagaga 394
||||||||||||||||||||||||||||||
Sbjct: 561 gtgtgtgtgtgtgtgtgtgagagagagaga 590
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 794
Length adjustment: 9
Effective length of query: 385
Effective length of database: 785
Effective search space: 302225
Effective search space used: 302225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
