XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCT
CCTCTTAAAAGTGTTGAGTAAAAAGGAGCATAGAAAAGAATTTAAAGGAT
CTCTTAGCAGCTCTGAGGGTAAATAGGGTGAATATTTTCACAACAGAGTC
AGAGAAAGAAATGGAACCTTTTGGCTAAAATATAGAAAAGTATACATCAT
GTGCACAAGTGTGAGTGAAGATTTGTTTCCAAATGATCACAATGACAAAG
AAAGACATTTGTAGACTGTACACACATATAAATAAATGTGCATATGTGTG
TGTATATATATATACTTTATAATTTATACTATAATAGAAAGTCATTATAG
TGTTAATTGGAATAAACTTACATAAATTATAAAACAACATTGTGTACAAT
CAATCCTGATGTTGAGGCTAGCTTGCTCTATGTACTGAGTTCTAAAAGAG
CCAGGACTATGTATGGAGACAAACAAACAAACAAAATACACAAAACAAAA
CAAAACAAAACAAAACAAAACAGGACAAATCCCAAGACTTAGCTGGAGAA
TATTATTTCCTATGGTACTTTGAGTAAAAATGGCCCACAAATACTAATAA
GGAGTACCATTATTAGGAGATATAGCTTTGCAGGACTAGCTGTGGCCTTG
TTGAATGAAGTGTGTCACTAAAGATGGCCTTGAGGTTTTAGAAGCTCCAG
TCAAGGCCAATGTCTCTGTCTCCTCTTN

TATACTATATAAACGTTTCCGCTATTAAATAACCGAGACAAACGACATAC
CAGCGCCAGCTAGTGACTAACAACGTCAGAAGAAGAGATGGTGGCGGCGA
TACCCCAGTTATACTTGTCCCCGGAAGAGCGCGAACCGCAGGTAGGGGTC
GCTTGTTCCCAACGCAAATACAAGAGCCGCGGATAGGGTACTCAACATTA
AATGCGTATGCACATCGGTTTCGACACTTACCTATAATAGGGTTGACACC
ATAACTCGTTGGGACACAACTAGACGTGTCTAATAATAATCTAAGCTGCG
CCACGTTTTGGTAATACGGTCGCGCGCGATAATATCATAGCGGAATAATT
CGGAAAGGATAAATCGGCAGACACCGCGCCNCATAAATAGCTTATCCGGC
GAGAGCATGTTCTCACAACCACCGCCGGTGCCGCTACACCAGGTACATCA
TCGGAGGCCTACACTATTGAGTATACGGGGCGCACAACCTAGTCCAACAA
TCACTTAGCTTTAGCGTCCAGGTAAGTTGCGAGGACACTAGGTGCACATC
TACATATCCGCAAATTGACCGGCTAGATTTTGCGATCTGCACACGTGCGC
AAGATAAGCGAACTAAGACTCGTAGTATCGTACAATTTAGCGCTTACTCA
CGTGTCCGCCACCGTTGGACTGATCACGGCCACAAGTTCACCCTTCCACG
TATGTCCCTTACGGGCCTCGGATTACCATACGGCCGACCGACGACCGTGC
CGGTGGGAATAGGTACGGGTGTCCGGATAACCGCTAAAGGCGCTCGCCCT
TTATCTCGCACATTACATTGGTGTATCGCCGCACTTGCACCGGCCCTGGC
CGTACGCGACGTCGCTCGATTAAATTAGTATACCTCAAAATACGCAACGC
GCGCGGCGCGAAGCTATTAATATTTAACCGCGCCGCCGGCGAAACAAATA
CCCAGTCGCATTACGTAATCCGTCACACACCATGACATACATTTCTTCAC
CGCCCTGCACCTCGAATTGTGCATATTTAACACACGACTCCGTGCAGTAT
TCTCCACGCCCTCATTTTGCCAACTCGGCCGAAAAATCCAGATATATCAC
GTGGGTGCCTCCCGCACTTGGGTGGGAACACACATCGGTTTTTATCCCGC
CCCGGCGTTTCAATCTCCATTACTACTATTAATATCCGTCCGCGCGCCGG
CGAN

Query= MSMg01no114_m22.b1 MSMg01no114_m22.b1 CHROMAT_FILE:
MSMg01no114_m22.b1 PHD_FILE: MSMg01no114_m22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:35 2005
         (628 letters)



>mm_chrX_77861879_77862906
          Length = 1028

 Score = 1114 bits (576), Expect = 0.0
 Identities = 607/624 (97%), Gaps = 12/624 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctcctcttaaaagtgttgagtaaaaaggagcatagaaaagaatttaaaggatct 64
           ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcctcaaaaaagtgttgagtaaaaaggagcatagaaaagaatttaaaggatct 264

                                                                       
Query: 65  cttagcagctctgagggtaaatagggtgaatattttcacaacagagtcagagaaagaaat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cttagcagctctgagggtaaatagggtgaatattttcacaacagagtcagagaaagaaat 324

                                                                       
Query: 125 ggaaccttttggctaaaatatagaaaagtatacatcatgtgcacaagtgtgagtgaagat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggaaccttttggctaaaatatagaaaagtatacatcatgtgcacaagtgtgagtgaagat 384

                                                                       
Query: 185 ttgtttccaaatgatcacaatgacaaagaaagacatttgtagactgtacacacatataaa 244
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 385 ttgtttccaaatgatcacaatgacaaagaaagtcatttgtagactgtacacacatataaa 444

                                                                       
Query: 245 taaatgtgcatatgtgtgtgtatatatatatactttataatttatactataatagaaagt 304
           ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||
Sbjct: 445 taaatgtgcatatgtgtgtgtatatatata--ctttataatttatactataatagaaagt 502

                                                                       
Query: 305 cattatagtgttaattggaataaacttacataaattataaaacaacattgtgtacaatca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cattatagtgttaattggaataaacttacataaattataaaacaacattgtgtacaatca 562

                                                                       
Query: 365 atcctgatgttgaggctagcttgctctatgtactgagttctaaaagagccaggactatgt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atcctgatgttgaggctagcttgctctatgtactgagttctaaaagagccaggactatgt 622

                                                                       
Query: 425 atggagacaaacaaacaaacaaaatacacaaaacaaaacaaaacaaaacaaaacaaaaca 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||          
Sbjct: 623 atggagacaaacaaacaaacaaaatacacaaaacaaaacaaaacaaaaca---------- 672

                                                                       
Query: 485 ggacaaatcccaagacttagctggagaatattatttcctatggtactttgagtaaaaatg 544
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ggacaaatccaaagacttagctggagaatattatttcctatggtactttgagtaaaaatg 732

                                                                       
Query: 545 gcccacaaatactaataaggagtaccattattaggagatatagctttgcaggactagctg 604
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 733 gcccacaaatactaataaggagtaccattattaggagatatagctttgctggactagctg 792

                                   
Query: 605 tggccttgttgaatgaagtgtgtc 628
           ||||||||||||||||||||||||
Sbjct: 793 tggccttgttgaatgaagtgtgtc 816


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space:   629124
Effective search space used:   629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)