ATTCTCNTNNATACAATGCGCGCTAXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCAGGAGCAAAGGCTCATTAAAAGCATGGNCATTTCGGTTAC
TTTTCCCTATACCCCTCAAACAGATATCTTTTGTCATGATTCAGGCTCGC
ATCAGCACTTAGCTCAATACCTGCTACATAATCTGTTAACTACTATAGGT
ATGGTAGCCATCATTTCTTGACAGGTACCTGAGAAACAAATTGTAGAAAA
TACATTTAATGTACTTTTGGTTTAACCAGGACACTGACAGTTTCTTTGTC
TTTTGTATCATTTCATGAGATGTAAAAATGAGTTCTGAACCCAGATGTGA
AGGCCTAGGAAGAGATATCTTTTTCTCTAGAAAAGAAATTTGTCTAAGTT
CTATGGTCAATTCTGTTGTGATAAACAGTAAATTTATTAAACTATTTGAG
TATCATTAAGTATACCGGGATTATTATAACCTAAGAATATATAAATTGTA
TAATCTCATGTTTACTAATATTGTTAATGACAAGCTATGTTCTTAATTGA
AGGTCATATATTGAACATAAATCTGACCTAATGGTCTTACAAACATCTCT
CCATCATCAGTATTTTAAAGTATATAGAGCCTCTAGTGAGTAAATGTCAT
CATAAGATTATAATAGGTTAGGAAAGAATTTAATGAAATAGCTGCTGAAA
ACAAAAAGAGGCAGCATTGTTTTGGGGATCCCACCCAAATCTTACCTACA
AATGTAAAGATTCATCAGTCTGTGTTGGAGCAGTCTTAAAATTCCCTTGG
AAGCAAGATTTCCCATCATGAGTAACTATTTAGGTTTTAATATGAATCTC
ATAAACTTGTTCAAATTTCTTAAAAAAATTCCCATGTTGAAAATGGTTGC
ATTGGCAGGAACCATTATTCCTTTTTTTTAACCCAAAAAGTTAAAAAAAA
TTCCACGTTTAACTTTTCCC

CCTATCTTNTNTTAAAGCATTGGAGGCGTGGGCCXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCCATTAAAATAGCACAATAGTTGC
CCATCCCTGTGAGCTGCCCTTAAATCAAACCCAGTTCCCCTGCAAGGACT
GCCAGTGCTTTTAACTGCTGAGCCACCTCTCCAGCCCCTTATTTACTTTT
TGACTGCTGTGACAAAACGCCAATGCACAGAGTTCCAGAGGGTTAGATTA
CAGGGTGGCAGAGGGAAAGGCAGCATGTGTCAGGCAGCTGGAGTGGTAGC
TGAGAACTCATATCTAGAACCCCCATCAGGAAGCAGAATAGACACCAAAT
GGCATGAGTCTTTTGAAACTTAAAGCCCTACCCATAATGACTTACTTCTG
TTTTCAAGGCCGTATCTCCTAATGCTTCCCAAATAGTCACCATCTGGGGA
CATGTCTGAGTCTTAAAGGGGAGAATTCGCTGAGTTATGTTCCCCAGCTC
CCTCTTTTTAAATTCTATTTGAAATATGGTCTCATTAAGTTGCCCAGGAT
AGCTCACTGTGGCATCTAGGTAGGCCTTGAATTTGTCCCTCCTCCTGCAG
AGCTGAGATTGCATGTGTTCATCACAATACCGGGTTCATGTGGTACCAAA
GATTTAACTCGTGGCCTTATGCATGCTAGGCAAGCACTCTACCAATTGAG
CTACATCCCAAGCCCCAACAGCATTCATTTTGGGCTTAAGTTACATGAGT
GTGGTTCTGCTAGGCTTCTGTGGTTTTGTCTTGATATATCTTTGTATTTC
TGGCATTCTGGCATAAGAAAAGACATTATTAAGGCACTTTCCATTCTGAG
GAAGGTCACAAAGCATTGTAAAAGGATCAAATCCTGTGATGTATTGTTGA
AACCGTCCTCCTAAAAAACATGTTCTTAATGGACCTGGTCCCAAAGGGAA
GTCCACAAAGCTTCCAAAAGGAACCAAAATGGTAATTTACCCCCAGGGCC
CCCAGGTTAAAGCTTTCCAAGGCCCTTAATAAAATTAAAAATT

Query= MSMg01no122_o17.b1 MSMg01no122_o17.b1 CHROMAT_FILE:
MSMg01no122_o17.b1 PHD_FILE: MSMg01no122_o17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:31:55 2005
         (646 letters)



>mm_chrX_163313998_163315043
          Length = 1046

 Score = 1203 bits (622), Expect = 0.0
 Identities = 640/646 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   agatatcttttgtcatgattcaggctcgcatcagcacttagctcaatacctgctacataa 60
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 agatatcttttgtcatgattcaggctcacatcagcacttagctcaatacctgctacataa 260

                                                                       
Query: 61  tctgttaactactataggtatggtagccatcatttcttgacaggtacctgagaaacaaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctgttaactactataggtatggtagccatcatttcttgacaggtacctgagaaacaaat 320

                                                                       
Query: 121 tgtagaaaatacatttaatgtacttttggtttaaccaggacactgacagtttctttgtct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtagaaaatacatttaatgtacttttggtttaaccaggacactgacagtttctttgtct 380

                                                                       
Query: 181 tttgtatcatttcatgagatgtaaaaatgagttctgaacccagatgtgaaggcctaggaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttgtatcatttcatgagatgtaaaaatgagttctgaacccagatgtgaaggcctaggaa 440

                                                                       
Query: 241 gagatatctttttctctagaaaagaaatttgtctaagttctatggtcaattctgttgtga 300
           ||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||
Sbjct: 441 gagatatctttttctctagaagagaaatttgccaaagttctatggtcaattctgttgtga 500

                                                                       
Query: 301 taaacagtaaatttattaaactatttgagtatcattaagtataccgggattattataacc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taaacagtaaatttattaaactatttgagtatcattaagtataccgggattattataacc 560

                                                                       
Query: 361 taagaatatataaattgtataatctcatgtttactaatattgttaatgacaagctatgtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taagaatatataaattgtataatctcatgtttactaatattgttaatgacaagctatgtt 620

                                                                       
Query: 421 cttaattgaaggtcatatattgaacataaatctgacctaatggtcttacaaacatctctc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttaattgaaggtcatatattgaacataaatctgacctaatggtcttacaaacatctctc 680

                                                                       
Query: 481 catcatcagtattttaaagtatatagagcctctagtgagtaaatgtcatcataagattat 540
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 681 catcatcagtattttaaagtatatagagcctctagtgagttaatgtcatcataagattat 740

                                                                       
Query: 541 aataggttaggaaagaatttaatgaaatagctgctgaaaacaaaaagaggcagcattgtt 600
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aataggttaggaaagaacttaatgaaatagctgctgaaaacaaaaagaggcagcattgtt 800

                                                         
Query: 601 ttggggatcccacccaaatcttacctacaaatgtaaagattcatca 646
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttggggatcccacccaaatcttacctacaaatgtaaagattcatca 846


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space:   658896
Effective search space used:   658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)