Query= MSMg01no124_m08.b1 MSMg01no124_m08.b1 CHROMAT_FILE:
MSMg01no124_m08.b1 PHD_FILE: MSMg01no124_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:18 2005
(334 letters)
>mm_chrX_34043412_34044145
Length = 734
Score = 584 bits (302), Expect = e-171
Identities = 330/348 (94%), Gaps = 14/348 (4%)
Strand = Plus / Minus
Query: 1 ggttttaatgtgcttactttaaaaaattaagaaacaaaaggaatttgtgagtcatttact 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 ggttttaatgtgcttgctttaaaaaattaagaaacaaaaggaatttgtgagtcatttact 617
Query: 61 tacaaatatcaataaaaatctaatttaagtgtctctccattgaatttaattaatgctcaa 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 616 tacaaatatcaataaaaatctaatttaaatgtctctccattgaatttaattaatgctcaa 557
Query: 121 gccagaaa--------------aattaattaatcttaagagttttgaataagggctatac 166
|||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gccagaaaaattaattaatcttaattaattaatcttaagagttttgaataagggctatac 497
Query: 167 agtatgatgttgtgctatgtatgaggtctactcagcacgatgcggtgcatcttatcaaaa 226
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 attatgatgttgtgctatgtatgaggtctactcagcacgatgcggtgcatcttatcaaaa 437
Query: 227 cactctatgttgtgttgagtattatcatgacattatttctgtcaattttagaggtctctg 286
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 436 cactctatgttgtgttgagtattaccatgacattatttctgtcaattttagaggtctctg 377
Query: 287 gaccttggttgaaatctctctctgtgggaataatgaacacttataatc 334
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gaccttggttgaaatctctctctgtgggaataatgaacacttataatc 329
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_m08.g1 MSMg01no124_m08.g1 CHROMAT_FILE:
MSMg01no124_m08.g1 PHD_FILE: MSMg01no124_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:19 2005
(684 letters)
>mm_chrX_33886129_33887212
Length = 1084
Score = 1315 bits (680), Expect = 0.0
Identities = 683/684 (99%)
Strand = Plus / Plus
Query: 1 gcagtcactggaggcaggaaatcctcctttagttttacctggtatacatcaccggagcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcagtcactggaggcaggaaatcctcctttagttttacctggtatacatcaccggagcca 260
Query: 61 ttggagctcatcaatggaaagcaatacctttgggataataagatcttttgaaattagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggagctcatcaatggaaagcaatacctttgggataataagatcttttgaaattagaag 320
Query: 121 tgagaatatttgctacctgagcttgttatccaatggcccagtgacattggtgacaagtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagaatatttgctacctgagcttgttatccaatggcccagtgacattggtgacaagtaa 380
Query: 181 aaggatcagctttatatataatctagttatagctccctaagtcactgggtattaaggcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaggatcagctttatatataatctagttatagctccctaagtcactgggtattaaggcag 440
Query: 241 tttacttttctttctttctctctttccctcccccttctttctccccctttgctataatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttacttttctttctttctctctttccctcccccttctttctccccctttgctataatct 500
Query: 301 gattgcaaaacaacacaatgcaaggatgtcactggtggagaaagatagctctttctagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gattgcaaaacaacacaatgcaaggatgtcactggtggagaaagatagctctttctagat 560
Query: 361 aaggcaggcattttatctggactgacatctgactgaaggcatttattcttactattgttt 420
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 561 aaggcaggcattttatctggactgacatctaactgaaggcatttattcttactattgttt 620
Query: 421 accccatcactctgataatgtgaaatgctttcttgtgagacaagctggccctgctctgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 accccatcactctgataatgtgaaatgctttcttgtgagacaagctggccctgctctgat 680
Query: 481 ttaaaaatgtctccccaaagtgttttcaaaatccctatcttaaatgggtaaaggacagac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttaaaaatgtctccccaaagtgttttcaaaatccctatcttaaatgggtaaaggacagac 740
Query: 541 attccagtttatacctctatcatcataggtaagagtctttttgtttatctttctagagtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 attccagtttatacctctatcatcataggtaagagtctttttgtttatctttctagagtc 800
Query: 601 agaaagaagggagagtatcagaaagggaaggagaaaagtgtatgtggacgtgtgtacatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agaaagaagggagagtatcagaaagggaaggagaaaagtgtatgtggacgtgtgtacatc 860
Query: 661 tacagatggatcactggctggctg 684
||||||||||||||||||||||||
Sbjct: 861 tacagatggatcactggctggctg 884
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1084
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1074
Effective search space: 723876
Effective search space used: 723876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
