Query= MSMg01no130_f19.b1 MSMg01no130_f19.b1 CHROMAT_FILE:
MSMg01no130_f19.b1 PHD_FILE: MSMg01no130_f19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:07 2005
(375 letters)
>mm_chrX_48746744_48747518
Length = 775
Score = 677 bits (350), Expect = 0.0
Identities = 365/370 (98%)
Strand = Plus / Minus
Query: 6 aggttgcttgtctgaatgagaaagtctacttcccaccctcaaagttatcctccagaaacc 65
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 575 aggttgcttgtctgaatgtgtaagtctacttcccaccctcaaagttatcctccagaaacc 516
Query: 66 taagaagcacctttcatgtaagctgcctctccctctccctctccattgatttttgtctct 125
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 515 taagaagcacctttcatgtaagctccctctccctctccctctccattgatttttgtctct 456
Query: 126 gtgacagatgcgtatgaatcccataccatggcacctacatcctgtctcaacctgaccgcc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gtgacagatgcgtatgaatcccataccatggcacctacatcctgtctcaacctgaccgcc 396
Query: 186 aatccctctccagttcctgccaggctcctctgctgcccactatttttccacgaagcaggc 245
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 395 aatccctctccagttcctgccagactcctctgctgcccactatttttccacgaagcaggc 336
Query: 246 tgctttacacttctgtgccattcattgttctttcccttctgtctcttcttcctttgtctc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgctttacacttctgtgccattcattgttctttcccttctgtctcttcttcctttgtctc 276
Query: 306 attcttcctttaggcgaacctaaagatgccatcagggtgctatcctcacattctgttctt 365
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 attcttcctttaggcaaacctaaagatgccatcagggtgctatcctcacattctgttctt 216
Query: 366 gcttccattt 375
||||||||||
Sbjct: 215 gcttccattt 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no130_f19.g1 MSMg01no130_f19.g1 CHROMAT_FILE:
MSMg01no130_f19.g1 PHD_FILE: MSMg01no130_f19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:07 2005
(329 letters)
>mm_chr9_18249518_18250248
Length = 731
Score = 381 bits (197), Expect = e-110
Identities = 296/329 (89%), Gaps = 4/329 (1%)
Strand = Plus / Minus
Query: 1 cagaaatttaaattcaaggcctcaaggccacaagacctgcttagcctaagttaagctttt 60
||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 528 cagaaatttaaattcaaggtctcaaggccacaagacctgcttagccggagttaagctttt 469
Query: 61 gtaactacctagta-gcttcacaaaactacctgctaaatatatagagccttctcatctaa 119
| ||||| |||||| | |||||||||||| |||||||||| ||| | ||||||||||| |
Sbjct: 468 ggaactatctagtaggtttcacaaaactagctgctaaatacatacacccttctcatctga 409
Query: 120 attctgtaaatgaaggcgtt-tcccttgctctgtaggttgctgtagaatctatcccagag 178
||||| ||| | ||||| || ||| ||||||||||||||||||| ||||||||||||||
Sbjct: 408 attctataatttaaggc-ttatcctttgctctgtaggttgctgttgaatctatcccagat 350
Query: 179 tcctactgtggatcataagtgaccaaaagaatgttttcacatgaattctcttatagaaca 238
||||||||||||||| || | |||||||| |||||| |||||||||||||||| | ||||
Sbjct: 349 tcctactgtggatcacaactcaccaaaaggatgtttccacatgaattctcttacataaca 290
Query: 239 tttctatccaaactggaaacaccattatttaaaacacgactgcttatat-ttttgccttt 297
|||| |||||||||||||||||||||||||||||||| || |||||||| ||||||||||
Sbjct: 289 tttcgatccaaactggaaacaccattatttaaaacactaccgcttatatcttttgccttt 230
Query: 298 ccaaacgcttaaaaaggagtgagttgggt 326
||||| |||||||||||||| ||||||||
Sbjct: 229 ccaaaagcttaaaaaggagtaagttgggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 731
Length adjustment: 9
Effective length of query: 320
Effective length of database: 722
Effective search space: 231040
Effective search space used: 231040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
