Query= MSMg01no133_p13.b1 MSMg01no133_p13.b1 CHROMAT_FILE:
MSMg01no133_p13.b1 PHD_FILE: MSMg01no133_p13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:56 2005
(665 letters)
>mm_chrX_40316181_40317245
Length = 1065
Score = 1237 bits (640), Expect = 0.0
Identities = 655/660 (99%), Gaps = 1/660 (0%)
Strand = Plus / Plus
Query: 6 gaattcactgtttgccacattttcgattttgattggtgttttcaggagtccaactatgat 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcactgtttgccacattttcgattttgattggtgttttcaggagtccaactatgat 265
Query: 66 catttgatgtgttatgaaaacaacattttgaccaacatgttaaaaactgaaataaaacag 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 catttgatgtgttatgaaaacaacattttgaccaacatgttaaaaactgaaataaaacag 325
Query: 126 tatatatggtagagcatcacaatgagtaaaggaataaattgttccatgaaactttggttt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tatatatggtagagcatcacaatgagtaaaggaataaattgttccatgaaactttggttt 385
Query: 186 tagttttgtatagtatgatttaaaatctgattctaaatgtagaatatagtgagacgaata 245
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 386 tagttttgtatagtatgatttaaaatctgattctaaatgtggaatatagtgagacaaata 445
Query: 246 aattgtaaaacattgatctacaatctggtcaaatgattgatatgtcaagttgtttatcat 305
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aattgtaaaacattgatttacaatctggtcaaatgattgatatgtcaagttgtttatcat 505
Query: 306 gctactggttttaactgtaaaacaattgtggattaaaatgatatacttttgcatatcatt 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gctactggttttaactgtaaaacaattgtggattaaaatgatatacttttgcatatcatt 565
Query: 366 agttaagtattaattatgtggggagtttcattgtttgaataatttttatttttgctattt 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 agttaagtattaattatgtggggagtttcattgtttgaataatttttatttttgctattt 625
Query: 426 ttttggttaagattataattacatcatttcaccttccaaaccctcctaaatagccctgtt 485
||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 626 ttt-ggttaagattataattacatcatttcaccttccaaaccctcccaaatagccctgtt 684
Query: 486 caaattcatggcccctttttaaaaacaatgttgtgacatgaatatatgtatatacatatt 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 caaattcatggcccctttttaaaaacaatgttgtgacatgaatatatgtatatacatatt 744
Query: 546 cataagtataaccagatcagtctgaataatgttacttgtatgtatattttcagacctgat 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cataagtataaccagatcagtctgaataatgttacttgtatgtatattttcagacctgat 804
Query: 606 catattgtatcagaagtcaattgatgtacttttccctgatgaagactatttctcctctct 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 catattgtatcagaagtcaattgatgtacttttccctgatgaagactatttctcctctct 864
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no133_p13.g1 MSMg01no133_p13.g1 CHROMAT_FILE:
MSMg01no133_p13.g1 PHD_FILE: MSMg01no133_p13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:56 2005
(234 letters)
>mm_chrX_40373374_40374006
Length = 633
Score = 441 bits (228), Expect = e-128
Identities = 231/232 (99%), Gaps = 1/232 (0%)
Strand = Plus / Minus
Query: 1 ctacatttagaggcagcatttatacagtttcaaagtaactaagccattttgcacttcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ctacatttagaggcagcatttatacagtttcaaagtaactaagccattttgcacttcatt 372
Query: 61 gatctttactagagaacagttctgcatgtgctccctctatccataaagccatatccagct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gatctttactagagaacagttctgcatgtgctccctctatccataaagccatatccagc- 313
Query: 121 tttttacatataataagcaagtagtatttttgcaaactccattttataaatacttgagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tttttacatataataagcaagtagtatttttgcaaactccattttataaatacttgagac 253
Query: 181 actgaaccaattgatctagtaataatacagaaaacatggtgcatgttattgc 232
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 actgaaccaattgatctagtaataatacagaaaacatggtgcatgttattgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 633
Length adjustment: 9
Effective length of query: 225
Effective length of database: 624
Effective search space: 140400
Effective search space used: 140400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
