NNNNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAAAGAGGAT
CCGCGGAATTCTTTATATTACTTGGATATTAGTCCCCTATCTGATTTAGG
ATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCTTTTTATCTTATTGA
CTGTGTCTTTGGCCTTACAGAACCTTTGCATTTTTATGAGGTCCCATTTG
TTGATTCTAGATCTCACAGCACAAGCTATTGCTGTTCTATTCAGGAATTT
TTCCCCTGTACCCTTATCTTCAAGGCTTTTCCTCACTTTTCCTCTATAAG
TTTCACTATCTCTGGTTTTATGTGGAGTTCCTTGATGCACTTAGATTTGA
CCTTAGTACAAGGAGATAGGAATGGATCAATTTGCATTCTTCTACATGTT
AACCGCCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTCTTTTTTCCA
CTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATAGGTGTGTG
GGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTACTTGTCTGTCT
CTATACCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTACAGCTT
TAGGTCAGGCATGGTGATTGCACCAGAGGTTCTTTTATTGTTGAAAATAG
TTTTTGCTATCCTAGGTTTTTTGTAATTCCAGATGAATTTGGAGATTGCC
CTTTCCAATTCGTTGAAGAATTGAG

NNNNNACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAACAAAAGTGACAAGCCCAGA
GCTCTTGAACTTGATTTGCAAAGTGACAGTTTTAGATCTTTCATTCAATT
TAAGTGTTTCTTGGTACTGAGTGATCAAAAGTTCTTAAACTGTTTTAAAA
GTGGCATCTAACACAACACAAAAGCAGAACAGGCAGAGGTAGTATGAATG
GCGGAGAAGAACTAAAAGGCACTAGAGGAGAAATAGATAAAATATTATAT
GTTTTCTCTTATATTCACAGTCTATGAACACAAAATGTGTATAGCATGAA
AGCAAAAAAGGGGCTAGTTTGGAGAAAGGGACCAGAGGGAAAAAGGGAGA
TGCTAAAGAATGGCCTTAGAATATAAATGGAAGCAAAATAGAATAATATA
TGTATGAAAATGTCATAATGAAACTTACTAATTTGTATGCCATCTGCCTT
AGTTAGGTTTCTACTGGTGTGATAAAACTCTATGACCAAAATAACTTGAG
GAGGAAACAGTCTAATTTTAACTCTTAAACACATCCAGAAGTTGGATGTG
GTTACTTCAATATGTCTATTATCCATGCCAATTAGAATCTAAGGCTAGAG
GATTGTGAATTTGACATCAGCATAGGCTAGAAACCTAGACCCTGTCTCAA
AAGTTAGCATTAAAATTGGTATC

Query= MSMg01no136_h19.g1 MSMg01no136_h19.g1 CHROMAT_FILE:
MSMg01no136_h19.g1 PHD_FILE: MSMg01no136_h19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:53 2005
         (644 letters)



>mm_chrX_82137502_82138542
          Length = 1041

 Score = 1158 bits (599), Expect = 0.0
 Identities = 610/615 (99%), Gaps = 3/615 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aacaaaagtgacaagcccagagctcttgaacttgatttgcaaagtgacagttttagatct 60
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 612 aacaaaagtgacaagcccagagctcttgaccttgatttgcaaagtgacagttttagatct 553

                                                                       
Query: 61  ttcattcaatttaagtgtttcttggtactgagtgatcaaaagttcttaaactgttttaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ttcattcaatttaagtgtttcttggtactgagtgatcaaaagttcttaaactgttttaaa 493

                                                                       
Query: 121 agtggcatctaacacaacacaaaagcagaacaggcagaggtagtatgaatggcggagaag 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||
Sbjct: 492 agtggcatctaacacaacacaaaagcagaacaggcagaggtagtatgaatggcgg---ag 436

                                                                       
Query: 181 aactaaaaggcactagaggagaaatagataaaatattatatgttttctcttatattcaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aactaaaaggcactagaggagaaatagataaaatattatatgttttctcttatattcaca 376

                                                                       
Query: 241 gtctatgaacacaaaatgtgtatagcatgaaagcaaaaaaggggctagtttggagaaagg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gtctatgaacacaaaatgtgtatagcatgaaagcaaaaaaggggctagtttggagaaagg 316

                                                                       
Query: 301 gaccagagggaaaaagggagatgctaaagaatggccttagaatataaatggaagcaaaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gaccagagggaaaaagggagatgctaaagaatggccttagaatataaatggaagcaaaat 256

                                                                       
Query: 361 agaataatatatgtatgaaaatgtcataatgaaacttactaatttgtatgccatctgcct 420
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 255 agaataatatatgtatgaaaatgtcataatgaaacctactaatttgtatgccatctgcct 196

                                                                       
Query: 421 tagttaggtttctactggtgtgataaaactctatgaccaaaataacttgaggaggaaaca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 tagttaggtttctactggtgtgataaaactctatgaccaaaataacttgaggaggaaaca 136

                                                                       
Query: 481 gtctaattttaactcttaaacacatccagaagttggatgtggttacttcaatatgtctat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gtctaattttaactcttaaacacatccagaagttggatgtggttacttcaatatgtctat 76

                                                                       
Query: 541 tatccatgccaattagaatctaaggctagaggattgtgaatttgacatcagcataggcta 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75  tatccatgccaattagaatctaaggctagaggattgtgaatttgacatcagcataggcta 16

                          
Query: 601 gaaacctagaccctg 615
           |||||||||||||||
Sbjct: 15  gaaacctagaccctg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1041
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1031
Effective search space:   653654
Effective search space used:   653654
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)