Query= MSMg01no137_g17.b1 MSMg01no137_g17.b1 CHROMAT_FILE:
MSMg01no137_g17.b1 PHD_FILE: MSMg01no137_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:06 2005
(572 letters)
>mm_chrX_96969503_96970474
Length = 972
Score = 1098 bits (568), Expect = 0.0
Identities = 571/572 (99%)
Strand = Plus / Minus
Query: 1 cttgtgttatgaggctgtggaccccaggaaaggggaggcaaggatgagagataagtaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 cttgtgttatgaggctgtggaccccaggaaaggggaggcaaggatgagagataagtaccc 713
Query: 61 agttcctcttctctgccttaagtttctcttccccattaagtttctcttttctggttgtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 agttcctcttctctgccttaagtttctcttccccattaagtttctcttttctggttgtta 653
Query: 121 caacagggagcttcctaattagtccccaaacctaagcaaccaacattcatttcagtacta 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 caacagggaccttcctaattagtccccaaacctaagcaaccaacattcatttcagtacta 593
Query: 181 gtaaacctatgagcaggtacccacttggaaatagatgggaaacccaatttctgtatcagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gtaaacctatgagcaggtacccacttggaaatagatgggaaacccaatttctgtatcagg 533
Query: 241 gaggacacattggcaccttaggaccagaagatgagacaagagggtcaccaggaagagagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gaggacacattggcaccttaggaccagaagatgagacaagagggtcaccaggaagagagt 473
Query: 301 gcttggacctaataaaagcccatgttccctcagagtcagtggtgcctagttgtggaaccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gcttggacctaataaaagcccatgttccctcagagtcagtggtgcctagttgtggaaccc 413
Query: 361 ctctctatcccagaagtctataacacttaccaaaatcatcactcttcccttttctctgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ctctctatcccagaagtctataacacttaccaaaatcatcactcttcccttttctctgtc 353
Query: 421 ctattttcttatctttcttttcttaatgatttttctctttttaattatgtatatgcatgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ctattttcttatctttcttttcttaatgatttttctctttttaattatgtatatgcatgc 293
Query: 481 atatcactgtgtgagtatgtatggatgagtgtgtggaactacaggggccagaggtattgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 atatcactgtgtgagtatgtatggatgagtgtgtggaactacaggggccagaggtattgg 233
Query: 541 attccctggacccagagctacagtttgtgtcg 572
||||||||||||||||||||||||||||||||
Sbjct: 232 attccctggacccagagctacagtttgtgtcg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_g17.g1 MSMg01no137_g17.g1 CHROMAT_FILE:
MSMg01no137_g17.g1 PHD_FILE: MSMg01no137_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:06 2005
(644 letters)
>mm_chrX_96827400_96828443
Length = 1044
Score = 1183 bits (612), Expect = 0.0
Identities = 638/648 (98%), Gaps = 4/648 (0%)
Strand = Plus / Plus
Query: 1 aattcttctggaggcctgggcctttgttttcctttctctgccttgaactcatagcaatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattcttctggaggcctgggcctttgttttcctttctctgccttgaactcatagcaatct 260
Query: 61 ccctgcctcagcttcccaaaggccagtattacaggcacaagggagtttgtatttgcaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 ccctgcctcagcttcccaaaggccagtattacaggcacaagggagtttgtatttgtaccc 320
Query: 121 attggagtatttgttatgccaatctcttctggaccccccagggaggagtgtttccctttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attggagtatttgttatgccaatctcttctggaccccccagggaggagtgtttccctttg 380
Query: 181 gcctaggtagccatggtttcagagttgttcagagttcatcgaagactgctgacttcaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcctaggtagccatggtttcagagttgttcagagttcatcgaagactgctgacttcaaga 440
Query: 241 agctggcaatctttggcttcaaacatccttggctgtgtttcagcagcttaggtaatcagc 300
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agctggcaatcaatggcttcaaacatccttggctgtgtttcagcagcttaggtaatcagc 500
Query: 301 tacagtcctttggagctttctcaagctgtctgtggactgtttgaatcggccagtgttggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacagtcctttggagctttctcaagctgtctgtggactgtttgaatcggccagtgttggc 560
Query: 361 ataagggtagcatggctggctgtgtgcctgatgatcctttttgcttaaggcagctggagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ataagggtagcatggctggctgtgtgcctgatgatcctttttgcttaaggcagctggagc 620
Query: 421 aacaaggatgaacttgacagctgctaattctgagatcaaattgcttcattccccaacata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aacaaggatgaacttgacagctgctaattctgagatcaaattgcttcattccccaacata 680
Query: 481 gctgctttttt---aaaaaaagaaag-aaagaaagaaaatagaatatcagaggaaattcc 536
||||||||||| ||||||| |||| ||||||||||||| |||||||||||||||||||
Sbjct: 681 gctgctttttttttaaaaaaaaaaaggaaagaaagaaaattgaatatcagaggaaattcc 740
Query: 537 tacaagctggatatgatgacacatgctggaataccagcatttggaggctgaggcaggaag 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tacaagctggatatgatgacacatgctggaataccagcatttggaggctgaggcaggaag 800
Query: 597 attgctgtgggtacaaggccagcctgctttacatacagaaaggaaata 644
||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 801 attgctgtgggtacaaggccagcctgcattacatacagaaaggaaata 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
