NGGATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGNGATCCG
CGGAATTCACTTTTTACTTAAACATGAAACTCCTCCCAGACTAAAACCAG
ACCCATTCCCACCTTAATCCTCCTCCCAAGTTCAAGTCTACTTTTCTCCC
CTTTGATACAACCCAATTCAAATCAATTGTGTTGCCCCTAAACTCTTGGA
CATGTGGAAACCAGTAGAGCATGGCAAACCTATCACATACAAAAGCCTTA
CCTTTGATGAAAACTGATTCTCCATCCTTCATCAATAGTCCATATATTCG
CAGATGGGGATGATGGATTTTGATACCATACCACTTAGGGATGCAAGGCA
GACTGGCCTGATTTTGTGCAGATAGAGACATACAGTGTCTCAGTGACCTC
TCTGCCTTATTAGATTTCTACCATCTCTTCCGTGAGAGTTCCTAAGACAA
AGCTCCTCTACTGCTTGCCTCTTTCTGTGAGTATGTGTGTATGTACAAAT
ATGTCTATATTATACATGTCTCATTTTACATGCAAGTCAACACATAGTGT
TGTTTGCAATCAACTACTGGCACTATTTAACACTAGGCAATATGGCTTGA
GGCAGACATGGTGGACTCCGTAACAGACAGAACGTAGAGATGGCTAGAAA
TCATCCCAATTAGTTGTAGTATAGGTGCAATTTACACTTTTGACCTACAT
TTCTGTGTTCACCC

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCCTGGGAAGAGGAGGTGGGACT
TGATGCATTAGGGACTAATAAGACATCACTGACATTACCGTTAGGCGAAG
AAGGTTTGGAGCCCTCTTTGTCTGATGGGGCCTGTTGCTTGACAAGAGAG
TTCTTCTCCAAAATGCTTTGGAGGAGAATTGGAAAGAATACAGTTATGTA
GGGTAGGGAACAAACTTTTGAACTCCTTCTGGAAGAGGAGGCATTTATGA
ATTTCTTTTAAGCACACGTGGGAAGTCTATGGGATGCCTGGGCAGATGTG
CAATGTCCCATAGAGTCTTGGAAACTTTGCGTTAGTTCTCAAAACTTTTT
GGTGCATAAGGACCTGCCCTGAGAATTTGAAGATCCCAGATCTCCTTGGT
TAGATTGGGAAGGGTGTAGGGAACCTTGAATGTGTGGGGAAATTACCTGT
CCATGTTGTCCAGCAGACGATGGCCCAGGCACTGTGTTATCTTCTTTGAA
TTTGTGACTGGTATCTCCAGCCCTGTGTTTGGAAGATGCTGCAGGCACTC
TGGCACCCGACTGGTCAAAATCCCTAGGTTCTTCAAACCCAGTACACATA
GGCTGGCTTCTTTTCACCTATCTATGCATGGACACAGCAGATGACGCCAC
TCATTTTCTGGTG

Query= MSMg01no140_c13.g1 MSMg01no140_c13.g1 CHROMAT_FILE:
MSMg01no140_c13.g1 PHD_FILE: MSMg01no140_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:48 2005
         (570 letters)



>mm_chrX_121321761_121322730
          Length = 970

 Score =  441 bits (228), Expect = e-128
 Identities = 504/630 (80%), Gaps = 77/630 (12%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcctgggaagaggaggtgggacttgatgcattagggactaata--agacatcactgacat 58
           ||||||| ||||||||  | ||||||| |||| | ||| || |  ||| |||| |||  |
Sbjct: 150 tcctggggagaggaggcagaacttgatacatttgagac-aa-aggagaaatcagtgatgt 207

                                                                       
Query: 59  taccgttaggcgaagaaggtttggagccctctttgtctgatggggcctgttg-------- 110
           |||| || || |||| ||||||||| ||||| ||||||||||||||||||||        
Sbjct: 208 tacctttgggagaaggaggtttggatccctccttgtctgatggggcctgttgtaggtccc 267

                                                                       
Query: 111 cttgacaaga-gagttcttctccaaaatgctttggaggagaattggaaagaatacagtta 169
           |||||| ||| ||| |||| ||||| ||||||||| ||||||||||||||| || |||||
Sbjct: 268 cttgaccagaggag-tcttgtccaacatgctttggtggagaattggaaagattagagtta 326

                                                                       
Query: 170 tgtagggtaggg---aacaaacttt-tgaactccttctggaagaggaggcatttatgaat 225
           ||||||||||||   |||   ||||  ||||||||||||||||||||||||| ||||| |
Sbjct: 327 tgtagggtagggggtaac---ctttgggaactccttctggaagaggaggcatgtatgagt 383

                                                                       
Query: 226 tt-cttttaagcacacgtgggaagtctatgggatgcctgggcagatgtgcaatgtcccat 284
           || ||||| ||||||  ||| |||||| ||||||||||||||||||||| ||||||||||
Sbjct: 384 ttcctttt-agcacaattggaaagtctttgggatgcctgggcagatgtggaatgtcccat 442

                                                                       
Query: 285 agagtcttggaaact-t-tgcgttagttctcaaaactttttgg--tgcataagga----- 335
           ||| ||||||||| | | || ||||||||| | ||| | ||||  || ||| |||     
Sbjct: 443 agactcttggaaa-tatctg-gttagttct-agaacatcttgggttg-atagggacagtc 498

                                                                       
Query: 336 cctg-------------------------ccctgagaat-ttg-----------aagatc 358
           ||||                         ||||||| || |||           ||||||
Sbjct: 499 cctgagcatgttgggttgatagggagagtccctgagcatcttggggagaagtgaaagatc 558

                                                                       
Query: 359 ccagatctccttggttagattgggaagggtgt-agggaaccttgaatgtgtggggaaatt 417
           |||||||||||||| ||||| ||||||||||| | |||||||||||| ||||||||||||
Sbjct: 559 ccagatctccttggctagatcgggaagggtgtga-ggaaccttgaatttgtggggaaatt 617

                                                                       
Query: 418 acctgtccatgttgtccagcagacgatggcccaggcactgtgttatcttctttgaa-ttt 476
           ||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||| |||
Sbjct: 618 acctgtccatgttgtccagcagaagatggcccaggcactttgtgatcttctttgaacttt 677

                                                                       
Query: 477 gtgactggtatctccagccctgtgtttggaagatgctgcaggcactctggcacccgactg 536
            ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||| ||||
Sbjct: 678 -tgactggaatctccagccccgtgtttggaagatgttgcaggcactctggcacccaactg 736

                                         
Query: 537 gtcaaaatccctaggttcttcaaacccagt 566
           |||||||||| |||||||||||||| ||||
Sbjct: 737 gtcaaaatccataggttcttcaaacacagt 766


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space:   537600
Effective search space used:   537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)