Query= MSMg01no141_e01.b1 MSMg01no141_e01.b1 CHROMAT_FILE:
MSMg01no141_e01.b1 PHD_FILE: MSMg01no141_e01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:26 2005
(712 letters)
>mm_chrX_97093610_97094721
Length = 1112
Score = 1239 bits (641), Expect = 0.0
Identities = 694/712 (97%)
Strand = Plus / Plus
Query: 1 atattttccttttccagtaaatttttattggaaccattgtaacctcacattctattatta 60
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 atattttccttttcaagtaaatttttattgaaaccattgtaacctcacattctattatta 260
Query: 61 gaaataatcaaaggagaccttgcatagcttttatccaatttcctgtgaaggtgattatag 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaataatctaaggagaccttgcatagcttttatccaatttcctgtgaaggtgattatag 320
Query: 121 ttttataccaccacacctgaaagttatcacacatcttaagtctagttggaaaatttgatg 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 ttttataccaccacacctgaaagttatcacacatcttaagtctagttgggaaatttgatg 380
Query: 181 tgaatgactactttgtgacaaatcagcattggagaagtcagtgttggcactctttgtaac 240
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 381 tgaatgactactttgtgacaaatcagcattggagaagtccgtgttggcacgctttgtaac 440
Query: 241 ttggatgtctgcatgtagaatgaaaattgaaccatatttatcaccttgtacaaagctcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttggatgtctgcatgtagaatgaaaattgaaccatatttatcaccttgtacaaagctcaa 500
Query: 301 gtccaagtggatcaaggacctcaacataaaaccagatacactgaatcttatagaagagaa 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 gtccaagtggatcaaggacctcaacataaaaccagatacactgaatctaatagaagagaa 560
Query: 361 agtgggaaagaaccttgaatgcattagtacaggagacaatttcctgaacaggacaccaat 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtgggaaagagccttgaatgcattagtacaggagacaatttcctgaacaggacaccaat 620
Query: 421 gtctcaggctctaagatcaacaactgataaatgggacctcacaaaactgaaaaggttctg 480
||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||
Sbjct: 621 gtctcaggctctaagatcaacaattgataaatgagacctcacgaaactgaaaaggttcta 680
Query: 481 taaggcaaaggacagtgtcaataggataaaatggtagcctacagattgggaaaagatctt 540
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taaggcaaaggacattgtcaataggataaaatggtagcctacagattgggaaaagatctt 740
Query: 541 caccaactctacatctgccacagggctgatatccaaaatatataaagaactcaagaaatt 600
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 741 caccaactctacatctgccaaagggctaatatccaaaatatataaagaactcaagaaatt 800
Query: 601 agccatggattttgaaccactactatcctatggctagagcttttattctatgtagttgtt 660
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 801 agccatggattttgaaccactactatcctatggttagagcttttattctatgtagttgtt 860
Query: 661 gcactcctgtcnaagagctagggtcatcaatagtttagtcttcatcacctga 712
|||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 gcactcttgtcaaagagctagggtcatcaatagtttagtcttcatcacctga 912
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 712
Length of database: 1112
Length adjustment: 10
Effective length of query: 702
Effective length of database: 1102
Effective search space: 773604
Effective search space used: 773604
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no141_e01.g1 MSMg01no141_e01.g1 CHROMAT_FILE:
MSMg01no141_e01.g1 PHD_FILE: MSMg01no141_e01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:26 2005
(689 letters)
>mm_chrX_97224024_97225110
Length = 1087
Score = 638 bits (330), Expect = 0.0
Identities = 352/360 (97%), Gaps = 2/360 (0%)
Strand = Plus / Minus
Query: 1 aggttaaatttagtttggaataagaatcaccataaccacagagcgttctatggaataaac 60
||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||
Sbjct: 358 aggttaaatttagtttggaataagaatcagaaaaac--cagagcgttctatggaataaac 301
Query: 61 gtcattcatgatgagctttgtaggttcataaggttcttaaaagaatgtggagaagtggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gtcattcatgatgagctttgtaggttcataaggttcttaaaagaatgtggagaagtggca 241
Query: 121 gcagcaactagaatctcaggccagggaaactgcaatcatttatttactaactgttcatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gcagcaactagaatctcaggccagggaaactgcaatcatttatttactaactgttcatta 181
Query: 181 tctgcaaaacactattgtaggtcttgcaaatagagcagtatacagaataaagtccttacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tctgcaaaacactattgtaggtcttgcaaatagagcagtatacagaataaagtccttacc 121
Query: 241 tacatgagcctggcactacagtgagactaggaaaagaaaatgatattaataacaacaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 120 tacatgagcctggcactacagtgagactaggaaaagaaaatgatattaataacaataaca 61
Query: 301 gtaagagctaacaattttgagaattaatcatgggtcaggcaatgttcaaatgctgtatat 360
||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 60 gtaagagctaacaattttgagaactaaacatgggtcaggcaatgttcaaatgctgtatat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1087
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1077
Effective search space: 731283
Effective search space used: 731283
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
