Query= MSMg01no141_e21.b1 MSMg01no141_e21.b1 CHROMAT_FILE:
MSMg01no141_e21.b1 PHD_FILE: MSMg01no141_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:33 2005
(745 letters)
>mm_chrX_153126254_153127398
Length = 1145
Score = 1365 bits (706), Expect = 0.0
Identities = 736/746 (98%), Gaps = 1/746 (0%)
Strand = Plus / Minus
Query: 1 gtagctggatataaaattaacacaaataaacccttggcctttctttac-caaccgataaa 59
|||||||||||||||||||||||||||||| | |||||||||||||| ||| ||||||
Sbjct: 1015 gtagctggatataaaattaacacaaataaatcaatggcctttctttacacaaatgataaa 956
Query: 60 tggactgaaatgctttcttacagcaagagggagttttaactttgcatctacatttaaaaa 119
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 955 tggactgaaatgctttcttacagcaagagggagttttaactttgcatctaaatttaaaaa 896
Query: 120 aataaatgagggagagaattaattaaatgcaggtacatgttcaatgtcaaaacttagcca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 aataaatgagggagagaattaattaaatgcaggtacatgttcaatgtcaaaacttagcca 836
Query: 180 tgcaaggaaggaaggatgtattagccagacgtaatcaattccagctttagcgtcagagct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 tgcaaggaaggaaggatgtattagccagacgtaatcaattccagctttagcgtcagagct 776
Query: 240 gtggagttgagccattatgtcttttctgggcaagcttcttccctcatcactcagctcatt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 gtggagttgagccattatgtcttttctgggcaagcttcttccctcatcactcagctcatt 716
Query: 300 agtatgcagctggaaaatgtcagcacagagcatgccaaagcagacaaagaaatgacttga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 agtatgcagctggaaaatgtcagcacagagcatgccaaagcagacaaagaaatgacttga 656
Query: 360 gggagatttaaatgccatgactatacatattctcatacactataaagaacataactattc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gggagatttaaatgccatgactatacatattctcatacactataaagaacataactattc 596
Query: 420 acaggaggatacagctatagttttctttcagtgaaacaatccatattgcacctgtggtta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 acaggaggatacagctatagttttctttcagtgaaacaatccatattgcacctgtggtta 536
Query: 480 gaatgatgagaaaacaaacaaatttgagaatatgtaaagaatgatactgatatccttgat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gaatgatgagaaaacaaacaaatttgagaatatgtaaagaatgatactgatatccttgat 476
Query: 540 atcccagatttacacctgctattaatacacagtcgccacaaacaaaggttgtacctataa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 atcccagatttacacctgctattaatacacagtcgccacaaacaaaggttgtacctataa 416
Query: 600 cattacattggagagggctagtagaccttagacttacatctgtatttatttaaattccaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 cattacattggagagggctagtagaccttagacttacatctgtatttatttaaattccaa 356
Query: 660 gtttctatgtgatgcaaggaaagaagaggagagtgggaatttatagaatacataaattac 719
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gtttctctgtgatgcaagaaaagaagaggagagtgggaatttatagaatacataaattac 296
Query: 720 ccaaataaattttctttatttctgaa 745
| ||||||||||||||||||||||||
Sbjct: 295 caaaataaattttctttatttctgaa 270
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 745
Length of database: 1145
Length adjustment: 10
Effective length of query: 735
Effective length of database: 1135
Effective search space: 834225
Effective search space used: 834225
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no141_e21.g1 MSMg01no141_e21.g1 CHROMAT_FILE:
MSMg01no141_e21.g1 PHD_FILE: MSMg01no141_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:33 2005
(322 letters)
>mm_chrX_152973903_152974624
Length = 722
Score = 600 bits (310), Expect = e-176
Identities = 319/322 (99%)
Strand = Plus / Plus
Query: 1 ctagagttctttcctggaactctcttgcttatcaagctggccattcttggaaccctcaag 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 201 ctagagttctttcctggaactctcttgcttatgaagctggccattcttggaactctcaag 260
Query: 61 gccagcacatgatgtggcaggagtctccctacattgtttcccatcccaaaaaccctgggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccagcacatgatgtggcaggagtctccctacattgtttcccatcccaaaaaccctgggc 320
Query: 121 aacctctgtataacagcaatagaacccaggcatccataagggaaaataaagcactgtgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacctctgtataacagcaatagaacccaggcatccataagggaaaataaagcactgtgtg 380
Query: 181 aagaggaagagttggagttggattcagatgatggagtggagtgtgacctgagcaatatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagaggaagagttggagttggattcagatgatggagtggagtgtgacctgagcaatatgg 440
Query: 241 aaatcactgagggagcccaccagtactttgcagagatcaagaggcacagagaagagagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatcactgagggagcccaccagtactttgcagagatcaagaggcacagagaagagagaa 500
Query: 301 ggctacaacaatagctggacaa 322
||||||| ||||||||||||||
Sbjct: 501 ggctacagcaatagctggacaa 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
