Query= MSMg01no148_a09.b1 MSMg01no148_a09.b1 CHROMAT_FILE:
MSMg01no148_a09.b1 PHD_FILE: MSMg01no148_a09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:47 2005
(628 letters)
>mm_chrX_154457779_154458805
Length = 1027
Score = 1137 bits (588), Expect = 0.0
Identities = 622/646 (96%), Gaps = 22/646 (3%)
Strand = Plus / Minus
Query: 1 caactaaaagagggcatcaggtcacattacagatggttgtg---------------agcc 45
||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 970 caactaaaagagggcatcaggtcacattacagatggttgtgagccaccatgtggttagcc 911
Query: 46 accatgtggttgttgggaattgaactcaggacatctggaagagcagccagtgctcttaac 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 accatgtggttgttgggaattgaactcaggacatctggaagagcagccagtgctcttaac 851
Query: 106 tgctgagccatctctctggctccaatgacccaataattttaaatctcattctctataaag 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 tgctgagccatctctctggctccaatgacccaataattttaaatctcattctctataaag 791
Query: 166 ttttgcagattagtgttgcatagtttagtgttacatgattaaacatatatctgaacacag 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 ttttgcagattagtgttgcatagtttagtgttacatgattaaacatatatctgaacacag 731
Query: 226 tactttcttaggtcttcttagagcagaatcagctgttttctgtatcaagtaatatattgc 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 tactttcttaggtcttcttagagcagaatcagctgttttctgtatcaagtaatatattgc 671
Query: 286 aattaattttctttaatttctactttataagcagtatacatacatctaaaattagtg--- 342
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 aattaattttctttaatttctactttataagcagtatacatacatctaaaattagtgtgt 611
Query: 343 caccgcaatagttcttttttatcatataatccttgtgtatattatataagtcataataat 402
| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 610 ----gtaatagttcttttttatcatataatcctcgtgtatattatataagtcataataat 555
Query: 403 catgctactggaaaggtttagctaaatcattatcctaaaaataacctgtctttgctatat 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 catgctactggaaaggtttagctaaatcattatcctaaaaataacctgtctttgctatat 495
Query: 463 caaaaatttatttgaaaaaaatcatggcagaaattcttttaaatttttttcagagaattt 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 caaaaatttatttgaaaaaaatcatggcagaaattcttttaaatttttttcagagaattt 435
Query: 523 aattatcatagtgtcttttaaaacccattttgaatatagtacctctttgtatatagtggg 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 aattatcatagtgtcttttaaaacccattttgaatatagtacctctttgtatatagtggg 375
Query: 583 ttttgcataatttacactgttttcatttatcattttaatatcctag 628
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ttttgcataatttacactgttttcatttatcattttaatatcctag 329
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1027
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1017
Effective search space: 628506
Effective search space used: 628506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_a09.g1 MSMg01no148_a09.g1 CHROMAT_FILE:
MSMg01no148_a09.g1 PHD_FILE: MSMg01no148_a09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:47 2005
(639 letters)
>mm_chrX_154358912_154359950
Length = 1039
Score = 1170 bits (605), Expect = 0.0
Identities = 633/647 (97%), Gaps = 8/647 (1%)
Strand = Plus / Plus
Query: 1 agtaaagacaaaaaccaaaaaccaaaaccaaaaccaaaa--------aaaaaaaaaacca 52
||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 193 agtaaagacaaaaaccaaaaaccaaaaccaaaaccaaaaccaaaaaaaaaaaaaaaacca 252
Query: 53 agacaaaaaaatggggccaaggtactatgatgcacaaaatcatgaatatcttggctatga 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 agacaaaaaaatggggccaaggtactatgatgcacaaaatcatgaatatcttggctatga 312
Query: 113 atcaaaatgaccacaataatacttagctagtataaataagaggacgcttcttttgaaaaa 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 atcaaaatgaccacaataatacttagctagtataaataagaggacgcttcttttgaaaaa 372
Query: 173 gaacattaatgcagatcaactgtaattattgaactggccatatgcctcctatctttatct 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gaacattaatgcagatcaactgtaattattgaactggccatatgcctcctatctttatct 432
Query: 233 aagagggggttattatatatcttacacctacttggacccctctgatagctaagtaatatc 292
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 433 aagagggggttattatatatcttacacctactcggacccctctgatagctaagtaatatc 492
Query: 293 ctgatagccatttgtccaagctaagaggtaacaaggtgaaggtgaatctggccattcata 352
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 493 ctgatagccatttgtccaagctaagaggtaacaaggtgaaggtgaatctgggtattcata 552
Query: 353 ttcttgcccttaatgaaacctatgattgaataacaaacttgaagaaaggcatgttcttca 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ttcttgcccttaatgaaacctatgattgaataacaaacttgaagaaaggcatgttcttca 612
Query: 413 tacaaaatttataaacaacttgcaaatgataaccatacctaaattattaaattagcgatt 472
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 613 tacaaaatttataaacaacttgtaaatgataaccatacctaaattattaaattagcgatt 672
Query: 473 aaaacaatcaatgaagaactgagttttcaacaattaattacatttataatataattataa 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 aaaacaatcaatgaagaactgagttttcaacaattaattacatttataatataattataa 732
Query: 533 ataacttaatatatttatttacttattcatttttgatgcatgtgttgctatgtagttctg 592
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ataatttaatatatttatttacttattcatttttgatgcatgtgttgctatgtagttctg 792
Query: 593 ggtaggcttacatttatgaacttttgttatttttgcttttgcatctc 639
|||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 793 ggtaggcttaaatttatgaacttttgttatttttgcttttgcatctc 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
