CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCCGCGGAAT
TCTCTGAGCCTCACTGATCATTTCTGCTTTCAATGGGAGGCTGTGATTTG
AATGCAGTAATCAGAGCTCATGCACACCACTAAGCATGAAGTCCAGACCT
AAATAATCTCAGGCACCACAGACATTCTATTTAAAGGCTGCGGAGGTGTG
AAGCCGTGAAGAGGAGAGATGGACAAGGAGAGGTGATGCATGTACTTAGT
CCCTGTGGCCTGGGCCAGCATGGAGATAGCGTGTGTGGATGTACCCTTTA
CGTTCCCTTTTGTGTACACACTCGCAGACCCGTGTGCCAGGTTCAGGATC
TGCTTTCCAAGTGACAGGTGGCCCCAGCAAGCTGCTGTAATCACAACCTT
AGCCCCTCCTCCTGCCCACCTGAAGTCACCCTGGAGTCACATTTGTCATT
CAGCATTTACATAGCTGCCAGAACTTCAGAGCTCAATGCCTGGAAGTAAG
TGGACTTAGCCTTGAGTCCACCCTTTGCCACAGTTGGGAAGCCCGGGGCC
AAGGTCCTTGCTCTACGTATTACCCTTTTGGTTCTGGTCCATGGGTGAAG
TGCCTGCCCTTACACATGTGGCAGCCCCAGTGTCTCAGGGAGGGCAGGTA
ACACTGATGTCCCTTCCTACTTGCTAGGGACCCACTGCTTCCTAAGCT

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXATGGGAACCCAATTGTCCCAGGAAGCAAG
CACTGTTATTATCCACATCTGGCAGGGGTAAACTGAAACACTGGGGGTTA
AGTGACTCACCCAGGAGAAACACAACTGCACCAGCTTTGGGACAACCATT
CTATAGATTGCTACTCAGGAATCAAAAAGGGAAAGAACTACTAGAGCTGG
AAATGCAGCTCAGTTGGCAGAGTGCTAATCCAGCATGCATGTGATCCTGG
TTCAAACCCTAGCACCACATAACCCTACAGTTTTTAATATGTTGCCATTG
TGGAGGAAGTGGGTGTAAGGTATGGTTTCTCTCTTATAGCTACATGGAAA
TCTGTAAGTAGCACAAAAGTTTGTTTTAATGATGAAAATTCACCTCAGGT
CTTACGATTTCAGGAATTTTTATGCATAAATTCTTGCTCTACCTTCAACA
CAGACCCAATCCTACCCTGTTATGTTTGTGATGGAACCATGGACCAGCCC
CTTCTCTCTGAATGGACACTGCCTTGTTTGTGAGCAGATTACAAGAGAAT
TGCTTCACTCAACAACATGGACAAGAAGTCAAATGGACCAACTGCCTGTA
ACTTCAGCTCCAGGTGATGTATCATCCTCGTCTGACTTCTATAGG

Query= MSMg01no153_m03.b1 MSMg01no153_m03.b1 CHROMAT_FILE:
MSMg01no153_m03.b1 PHD_FILE: MSMg01no153_m03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:12 2005
         (657 letters)



>mm_chrX_68377857_68378913
          Length = 1057

 Score = 1201 bits (621), Expect = 0.0
 Identities = 645/653 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   ggaattctctgagcctcactgatcatttctgctttcaatgggaggctgtgatttgaatgc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 ggaattctctgagcctcactgatcatttctgctttcaatgggaggctgtgatttgaatgc 798

                                                                       
Query: 65  agtaatcagagctcatgcacaccactaagcatgaagtccagacctaaataatctcaggca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 agtaatcagagctcatgcacaccactaagcatgaagtccagacctaaataatctcaggca 738

                                                                       
Query: 125 ccacagacattctatttaaaggctgcggaggtgtgaagccgtgaagaggagagatggaca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ccacagacattctatttaaaggctgcggaggtgtgaagccgtgaagaggagagatggaca 678

                                                                       
Query: 185 aggagaggtgatgcatgtacttagtccctgtggcctgggccagcatggagatagcgtgtg 244
           ||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||
Sbjct: 677 aggagaggtgatgcatgtacttaatccctgtgggctgggccagcatggagatggcgtgtg 618

                                                                       
Query: 245 tggatgtaccctttacgttcccttttgtgtacacactcgcagacccgtgtgccaggttca 304
           |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tggatgtgtcctttacgttcccttttgtgtacacactcgcagacccgtgtgccaggttca 558

                                                                       
Query: 305 ggatctgctttccaagtgacaggtggccccagcaagctgctgtaatcacaaccttagccc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ggatctgctttccaagtgacaggtggccccagcaagctgctgtaatcacaaccttagccc 498

                                                                       
Query: 365 ctcctcctgcccacctgaagtcaccctggagtcacatttgtcattcagcatttacatagc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ctcctcctgcccacctgaagtcaccctggagtcacatttgtcattcagcatttacatagc 438

                                                                       
Query: 425 tgccagaacttcagagctcaatgcctggaagtaagtggacttagccttgagtccaccctt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tgccagaacttcagagctcaatgcctggaagtaagtggacttagccttgagtccaccctt 378

                                                                       
Query: 485 tgccacagttgggaagcccggggccaaggtccttgctctacgtattacccttttggttct 544
           |||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||
Sbjct: 377 tgccacagttgggaagcccggggccaaggtccttgctctatgtattaccctttcagttct 318

                                                                       
Query: 545 ggtccatgggtgaagtgcctgcccttacacatgtggcagccccagtgtctcagggagggc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ggtccatgggtgaagtgcctgcccttacacatgtggcagccccagtgtctcagggagggc 258

                                                                
Query: 605 aggtaacactgatgtcccttcctacttgctagggacccactgcttcctaagct 657
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aggtaacactgatgtcccttcctacttgctagggacccactgcttcctaagct 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space:   677409
Effective search space used:   677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no153_m03.g1 MSMg01no153_m03.g1 CHROMAT_FILE:
MSMg01no153_m03.g1 PHD_FILE: MSMg01no153_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:12 2005
         (624 letters)



>mm_chrX_68234806_68235829
          Length = 1024

 Score = 1191 bits (616), Expect = 0.0
 Identities = 622/624 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggaacccaattgtcccaggaagcaagcactgttattatccacatctggcaggggtaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgggaacccaattgtcccaggaagcaagcactgttattatccacatctggcaggggtaa 260

                                                                       
Query: 61  actgaaacactgggggttaagtgactcacccaggagaaacacaactgcaccagctttggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 261 actgaaacactgggggttaagtgactcacccaggagaaacacaactgcaccagctttggt 320

                                                                       
Query: 121 acaaccattctatagattgctactcaggaatcaaaaagggaaagaactactagagctgga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaaccattctatagattgctactcaggaatcaaaaagggaaagaactactagagctgga 380

                                                                       
Query: 181 aatgcagctcagttggcagagtgctaatccagcatgcatgtgatcctggttcaaacccta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatgcagctcagttggcagagtgctaatccagcatgcatgtgatcctggttcaaacccta 440

                                                                       
Query: 241 gcaccacataaccctacagtttttaatatgttgccattgtggaggaagtgggtgtaaggt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcaccacataaccctacagtttttaatatgttgccattgtggaggaagtgggtgtaaggt 500

                                                                       
Query: 301 atggtttctctcttatagctacatggaaatctgtaagtagcacaaaagtttgttttaatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atggtttctctcttatagctacatggaaatctgtaagtagcacaaaagtttgttttaatg 560

                                                                       
Query: 361 atgaaaattcacctcaggtcttacgatttcaggaatttttatgcataaattcttgctcta 420
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 atgaaaattcacctcaggtcttacgatttcaggaatctttatgcataaattcttgctcta 620

                                                                       
Query: 421 ccttcaacacagacccaatcctaccctgttatgtttgtgatggaaccatggaccagcccc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccttcaacacagacccaatcctaccctgttatgtttgtgatggaaccatggaccagcccc 680

                                                                       
Query: 481 ttctctctgaatggacactgccttgtttgtgagcagattacaagagaattgcttcactca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttctctctgaatggacactgccttgtttgtgagcagattacaagagaattgcttcactca 740

                                                                       
Query: 541 acaacatggacaagaagtcaaatggaccaactgcctgtaacttcagctccaggtgatgta 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acaacatggacaagaagtcaaatggaccaactgcctgtaacttcagctccaggtgatgta 800

                                   
Query: 601 tcatcctcgtctgacttctatagg 624
           ||||||||||||||||||||||||
Sbjct: 801 tcatcctcgtctgacttctatagg 824


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space:   622596
Effective search space used:   622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)