CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATAGTATCTGATACTGGGTCCTTGCTTCTCCCCCTTTAACTGGGA
GGACAGATTGACTCTCTGCCTTTGTTAATGGAAAATAAATCTGTTTTAGG
ATAGTGGCAATCTAAGGTAATTTCTTACAAGCAATGCAATGTCATTGTAA
GTAGTATCTGCTGAGTTGCCATTTCTCCTGGGAGGGAGAAATAGTCTGGG
ACACCCAAGGTCCATGACTTGGAATCTTCATGCCAATCTCATCTTCATTC
CTGAGCTTTCTGTTATTTTCCAAGTCAGAAGAACCAATGTGTATGATATT
GTTTTTATTCTTTCCCCCCCCCTCCCACATCATCTTTATTCTCAGTTCTA
GGTACTAAGAACCTAAACAATGTGACAGTGACCCACTGGGAGGTGTCCTC
TTCATAACTGGGGCTCCAATTTCCTCCTAGCCTATTTCTTGCCTTTTTTT
TTCCTTAAAAAAAAAAACCTTGTTAGGTCATATGTCTTCTCTTGAGGACA
GAACCTTCCAGCTATTTATGTTGTATTTTTAAATATTTCAAGAGATAACT
AGAGATTAGTATTGCATTGCCCTAGAGGGTACATAGAAATGTAATGAGNA
TCTTAGATGTAATCACTCAGAATCCAGCTAGAATGCGAGCCTGGTTAC

ATTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTCATGAAGCTTAACCTTCCAGCCTCT
GGCTGGCATTGCTTCCTCCTAAGGCCTGTTCCAATCATTCTACTCAAAGT
TTGCCTTTGCTTTACTTAAAGAAAGATCATATTAGCTTCACATTGACATA
AAACTTAAATACACATCAGGCTGTTCCTTTCTTCTCTATAGTGTTCACTT
CCTTGTTCCCATCACCTGTACCTAGAACAGTGTCAGCACCTTGGTGTTTG
ACAAAATGCTTAACCAAAAAGTTTGGCGTACTTAGTTACAATAAAATAAA
CTTTATTTATTTACAACCCCCACCCCAGCCAGTACATTTGGGTGGAAAAT
ATTTAGCCCACTGACATAAAAGACAATAAAAGGCACTTTGTAAACTCAAG
GCCAAGTACTTAACACAGCATTACTGATGAAAATAATGATAATTATGATG
ACTCCGAGGAAATGTTTCTTACCCTCACTATTGCTGACATTTGGGACCAG
ATGATTATGGTTGTAGGGACTGTCCTAAGCATTGGAAGATATCTTGTGGC
ATCCCTGACCTTTACTCACTGGATGCTAATAGCCAAAAACGTTGTCTGAC
ATTGCCAAATGTCCCTGGAAGGAAAACTCCTCTGAATGCCCTAGGGCATT

Query= MSMg01no162_c11.b1 MSMg01no162_c11.b1 CHROMAT_FILE:
MSMg01no162_c11.b1 PHD_FILE: MSMg01no162_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:27 2005
         (311 letters)



>mm_chrX_38956017_38956727
          Length = 711

 Score =  572 bits (296), Expect = e-168
 Identities = 302/304 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcatagtatctgatactgggtccttgcttctccccctttaactgggaggacagatt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gaattcatagtatctgatactgggtccttgcttctccccctttaactgggaggacagatt 449

                                                                       
Query: 65  gactctctgcctttgttaatggaaaataaatctgttttaggatagtggcaatctaaggta 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 448 gactctctgcctttgttaatggaaaataaatctgttttaggatagtggcaatctaagata 389

                                                                       
Query: 125 atttcttacaagcaatgcaatgtcattgtaagtagtatctgctgagttgccatttctcct 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 atttcttacaagcaatgcaatgtcattgtaagtagtatctgctgagttgccatttctcct 329

                                                                       
Query: 185 gggagggagaaatagtctgggacacccaaggtccatgacttggaatcttcatgccaatct 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gggagggagaaatagtctgggacacccaaggtccatgacttggaatcttcatgccaatct 269

                                                                       
Query: 245 catcttcattcctgagctttctgttattttccaagtcagaagaaccaatgtgtatgatat 304
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 268 catcttcattcctgagctttctgctattttccaagtcagaagaaccaatgtgtatgatat 209

               
Query: 305 tgtt 308
           ||||
Sbjct: 208 tgtt 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space:   212004
Effective search space used:   212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no162_c11.g1 MSMg01no162_c11.g1 CHROMAT_FILE:
MSMg01no162_c11.g1 PHD_FILE: MSMg01no162_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:27 2005
         (279 letters)



>mm_chrX_38921659_38922337
          Length = 679

 Score =  532 bits (275), Expect = e-155
 Identities = 278/279 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctcatgaagcttaaccttccagcctctggctggcattgcttcctcctaaggcctgttcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcatgaagcttaaccttccagcctctggctggcattgcttcctcctaaggcctgttcca 260

                                                                       
Query: 61  atcattctactcaaagtttgcctttgctttacttaaagaaagatcatattagcttcacat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcattctactcaaagtttgcctttgctttacttaaagaaagatcatattagcttcacat 320

                                                                       
Query: 121 tgacataaaacttaaatacacatcaggctgttcctttcttctctatagtgttcacttcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgacataaaacttaaatacacatcaggctgttcctttcttctctatagtgttcacttcct 380

                                                                       
Query: 181 tgttcccatcacctgtacctagaacagtgtcagcaccttggtgtttgacaaaatgcttaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttcccatcacctgtacctagaacagtgtcagcaccttggtgtttgacaaaatgcttaa 440

                                                  
Query: 241 ccaaaaagtttggcgtacttagttacaataaaataaact 279
           ||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 ccagaaagtttggcgtacttagttacaataaaataaact 479


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space:   180900
Effective search space used:   180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)