TATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGC
GGAATTCTTTGTTTATTCCCGTACCCTATTTTTAAATAGGTTTATTTGAT
TTTTATGGAGTCCATCTTCTTGATATATATATATATATATATATATATAT
ATATATATATATATATATATTAGAACCCTATCGTGTTTATAATTGGTAAA
CATCCTCTCCCAATCTGTTGGTGGCTTTNTTGTCTTATTGACAGTGTCTT
TGGCCTTACAGAAGCTTTGCAGTTTTATGAAGTCCTATATGTCGATTCTC
CATCTTACAGTACAAGCCCATTTGCCTGTTTTTTTGTTTTAAGGAAATTT
TTTACCCCTGGTGGGCCCCCCATTTTTTCCAAGGGTTTTTTTCCCCCCTT
TTTTTTTTTTTTTTTTTTATATTGGACTTTTTTCTTCTCTTCTCTATACT
TCTCCATTTTCTTCCCCCTTTTAATCTTTTATTTCATTTACCCCCCCCTT
TTCTTTCCTTTTCATATCTTTCCTTCCTCCCCTCATTCTCTCTTTCCACT
TTTTACTTCTTCCTCCTTTCTCCCCCCCTTTCTTCCTTTTCTCCTCCCTC
CCTCCCTTCCTTATTTTCTTTTCCTCTTTATATCTTTCTTCCCTCTCTCT
CTCTCCCACCTCTTTTTCTTCTCCCTTTCCCCTTTTTTCGTCCATCTCTA
TCTTTTACCCTTCTATCTCTCTCTATTATATTCCTCTCCTTCACCATTAC
TTCTACCTATTATCTAAATTATCTTTCCTCACTCTCCACCTTCCTTCTTT
N

CCCGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAATATTTTCCATGATTTTTCACT
GATTGTTGAAAGGTTGTATACTGTAGAGGTTAAAAGCATAGGTTGTATCT
GGATGCAAATAATCTGGATTGAATCTTGAAACTGCTGGGTTCCTGAATAA
GGTACTTTAGTTGAGTGAGGCCTCATTAACATAGATCCTTTTCTCTCCAA
TTGTGAAATTGTTATATTAATCTGTCTCCAAGGGTTATTGTGAAGATAAA
ATTAGTTAATACACATTGAATTCAACATTATTTCTGATATATCATGTGGT
TTGAAAATATTATTTACTAATATTATTTTTTATACTCCTATTTTACCATA
CTATATTTCTTGTGTTATTTATCATCCTTCCTCCACTGATTTGTATACAT
TTTGCATATATGAGTATATCATCTGCATGTCATCTGAAGGACTGACAGGT
CTGGGTTCAGTCAGAGAAGATGCACCTAACCCTCAAGAGATTGGAGGCCC
CAGGGATTGGAGAGGTCTGGTGGTGTGGCTATGTATATCTCCTTCCTCCC
ATTCTTTTTCCTTTTTTTTTTTCTCGTATCCGCATCTCTAGTTCACCTCT
TTCATTTCCCCTCCCACTTCTCCCCATTACTTCCTCTTCCTTTTTCTTCC
CTTTATCCCCACN

Query= MSMg01no165_i01.g1 MSMg01no165_i01.g1 CHROMAT_FILE:
MSMg01no165_i01.g1 PHD_FILE: MSMg01no165_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:41 2005
         (496 letters)



>mm_chrX_94898465_94899360
          Length = 896

 Score =  936 bits (484), Expect = 0.0
 Identities = 493/496 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatattttccatgatttttcactgattgttgaaaggttgtatactgtagaggttaaaagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatattttccatgatttttcactgattgttgaaaggttgtatactgtagaggttaaaagc 260

                                                                       
Query: 61  ataggttgtatctggatgcaaataatctggattgaatcttgaaactgctgggttcctgaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataggttgtatctggatgcaaataatctggattgaatcttgaaactgctgggttcctgaa 320

                                                                       
Query: 121 taaggtactttagttgagtgaggcctcattaacatagatccttttctctccaattgtgaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 taaggtactttagttgagtgaggcctcattaacatagatccttttctctccaattatgaa 380

                                                                       
Query: 181 attgttatattaatctgtctccaagggttattgtgaagataaaattagttaatacacatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attgttatattaatctgtctccaagggttattgtgaagataaaattagttaatacacatt 440

                                                                       
Query: 241 gaattcaacattatttctgatatatcatgtggtttgaaaatattatttactaatattatt 300
           |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 441 gaattcaacattatttctgatatatcatatggtttggaaatattatttactaatattatt 500

                                                                       
Query: 301 ttttatactcctattttaccatactatatttcttgtgttatttatcatccttcctccact 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttatactcctattttaccatactatatttcttgtgttatttatcatccttcctccact 560

                                                                       
Query: 361 gatttgtatacattttgcatatatgagtatatcatctgcatgtcatctgaaggactgaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gatttgtatacattttgcatatatgagtatatcatctgcatgtcatctgaaggactgaca 620

                                                                       
Query: 421 ggtctgggttcagtcagagaagatgcacctaaccctcaagagattggaggccccagggat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggtctgggttcagtcagagaagatgcacctaaccctcaagagattggaggccccagggat 680

                           
Query: 481 tggagaggtctggtgg 496
           ||||||||||||||||
Sbjct: 681 tggagaggtctggtgg 696


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space:   430596
Effective search space used:   430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)