Query= MSMg01no167_b09.b1 MSMg01no167_b09.b1 CHROMAT_FILE:
MSMg01no167_b09.b1 PHD_FILE: MSMg01no167_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:46 2005
(510 letters)
>mm_chrX_163277870_163278779
Length = 910
Score = 735 bits (380), Expect = 0.0
Identities = 398/404 (98%)
Strand = Plus / Minus
Query: 8 ggaattcttgaatattcttgaggtactttattacattagaatactctatcatagaagtat 67
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 404 ggaattcttgaatattcttgaggtactttattatgttagaatactctatcatagaagtat 345
Query: 68 acacagattatggtagtaaaaataacagatgtgatttaaaaattacttttttgttttcca 127
|||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 344 acacagattatggtagtaaaaataacaggtgtgatttaaaaattactttgttgttttcca 285
Query: 128 ttgtcacagtataataagaaatgtcccagatagttttcccaggctatgttttttatagat 187
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 284 ttgtcacagtataataagaaatatcccagatagttttcccaggctatgttttttatagat 225
Query: 188 ggaacaaggtatcacaatgatacatctacaccatggaatactattcagctattaaaaacc 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 ggaacaaggtatcacaatgatacatctacaccatggaatactattcagctattaaaaacc 165
Query: 248 aagacatcatgcaggcaaatgaatggaacttgagagtatcatcctaaataaggtaaccct 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 aagacatcatgcaggcaaatgaatggaacttgagagtatcatcctaaataaggtaaccct 105
Query: 308 gtcccaaaagaacacacatggtatgtacttataagtagatatttagccataaaatacagg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 gtcccaaaagaacacacatggtatgtacttataagtagatatttagccataaaatacagg 45
Query: 368 catcatgctacattccacagacccaaggaagctaagcaagaagg 411
||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 44 catcatgttacattccacagacccaaggaagctaagcaagaagg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 910
Length adjustment: 10
Effective length of query: 500
Effective length of database: 900
Effective search space: 450000
Effective search space used: 450000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no167_b09.g1 MSMg01no167_b09.g1 CHROMAT_FILE:
MSMg01no167_b09.g1 PHD_FILE: MSMg01no167_b09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:46 2005
(466 letters)
>mm_chrX_163137740_163138604
Length = 865
Score = 878 bits (454), Expect = 0.0
Identities = 463/466 (99%), Gaps = 1/466 (0%)
Strand = Plus / Plus
Query: 1 tctatataaccttggactccatataatcttgtctcttcatcctgggggtgacaaactgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctatataaccttggactccatataatcttgtctcttcatcctgggggtgacaaactgga 260
Query: 61 gttactatgtcccatttctgtggcctttgtatatactaggcaagtggtctaccaattgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttactatgtcccatttctgtggcctttgtatatactaggcaagtggtctaccaattgag 320
Query: 121 ccagccacacacaccctcccacaacccacctaggttttagatgcatttgtttcaccttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccagccacacacaccctcccacaacccacctaggttttagatgcatttgtttcaccttgg 380
Query: 181 atttccttagatgctgagtacagaatgcaaagagctgggagtaagatgtcataaagggta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttccttagatgctgagtacagaatgcaaagagctgggagtaagatgtcataaagggta 440
Query: 241 tgcttttggggtgaaatttgaatgtctttgctctaagaaaatgcatccttgtcatatgta 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 tgcttttggggtgaaatttgaatgtctttgctctaa-aaaatgcatccttgtcatatgta 499
Query: 301 gttcaaggtggtaaggtttggaatctaagcttatttaccttcctcttagctctgaatttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gttcaaggtggtaaggtttggaatctaagcttatttaccttcctcttagctctgaatttt 559
Query: 361 gtctcctcaaccatatgcctgctttcagtgatgaagacaatttaaaaccaggacaaagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtctcctcaaccatatgcctgctttcagtgatgaagacaatttaaaaccaggacaaagaa 619
Query: 421 tatttagatttcatggctggtgactaatcatggcatttgaaaaagg 466
||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 620 tatttagatttcatgactggtgacaaatcatggcatttgaaaaagg 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 865
Length adjustment: 10
Effective length of query: 456
Effective length of database: 855
Effective search space: 389880
Effective search space used: 389880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
