Query= MSMg01no170_e09.b1 MSMg01no170_e09.b1 CHROMAT_FILE:
MSMg01no170_e09.b1 PHD_FILE: MSMg01no170_e09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:11 2005
(321 letters)
>mm_chrX_60696675_60697395
Length = 721
Score = 600 bits (310), Expect = e-176
Identities = 316/318 (99%)
Strand = Plus / Minus
Query: 4 ggaattctagattaagcacctaaatttaatttcaaaagaaggtgaaaaataccttaaaaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ggaattctagattaagcacctaaatttaatttcaaaagaaggtgaaaaataccttaaaaa 462
Query: 64 gcacttaattaaggatatctttcagttcatgatggtatttattctgaaaatttcgtgtac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gcacttaattaaggatatctttcagttcatgatggtatttattctgaaaatttcgtgtac 402
Query: 124 atctaacacaaaggagttcttgaaataaaaacaaagtaaaattatagaacaaagcaacaa 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 401 atctaacacaaaggagttcttgaaataaaaacaaagtaaaattatagaacaaagcaacca 342
Query: 184 tgaacaaaatacaatatactatacaactttttagaaatttgtataaaagctttcaaagag 243
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 341 tgaacaaaatacaatatactatacaactttttataaatttgtataaaagctttcaaagag 282
Query: 244 atgtgtcaattatagtcatttctttttcttgtttatgtggcaaattgctttcaaaaggaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 atgtgtcaattatagtcatttctttttcttgtttatgtggcaaattgctttcaaaaggaa 222
Query: 304 agtactgcattttatctt 321
||||||||||||||||||
Sbjct: 221 agtactgcattttatctt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no170_e09.g1 MSMg01no170_e09.g1 CHROMAT_FILE:
MSMg01no170_e09.g1 PHD_FILE: MSMg01no170_e09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:11 2005
(288 letters)
>mm_chrX_60540066_60540754
Length = 689
Score = 534 bits (276), Expect = e-156
Identities = 286/290 (98%), Gaps = 3/290 (1%)
Strand = Plus / Plus
Query: 1 tgtacccatttaataacttcttatttttattcactctgtcctttacaaactacatttaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtacccatttaataacttcttatttttattcactctgtcctttacaaactacatttaga 260
Query: 61 tttctgtattttttaacttgacagtgttatccatctcatataaatagaatcttaccatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttctgtattttttaacttgacagtgttatccatctcatataaatagaatcttaccatat 320
Query: 121 -gcctgtatatagtaagttcatttaatataggttaataccttcaacatccatgaatgatg 179
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcctgtatatagtaagtttatttaatataggttaataccttcaacatccatgaatgatg 380
Query: 180 tggtaaaggttaaagtttacttctaataactgaacaacaatatattttatggact--gtg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 tggtaaaggttaaagtttacttctaataactgaacaacaatatattttatggactctgtg 440
Query: 238 tctctgtttgattgctgtgaagaaacatcatgaccaaggcagttctaata 287
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctctgtttgattgctgtgaagaaacatcatgaccaaggcagttctaata 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 689
Length adjustment: 9
Effective length of query: 279
Effective length of database: 680
Effective search space: 189720
Effective search space used: 189720
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
