Query= MSMg01no173_a07.b1 MSMg01no173_a07.b1 CHROMAT_FILE:
MSMg01no173_a07.b1 PHD_FILE: MSMg01no173_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:36 2005
(316 letters)
>mm_chrX_22621618_22622333
Length = 716
Score = 586 bits (303), Expect = e-172
Identities = 309/311 (99%)
Strand = Plus / Minus
Query: 5 gaattctacatgttattctttgaacaacttttagcttaggattaaaaaggaagtcatatg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gaattctacatgttattctttgaacaacttttagcttaggattaaaaaggaagtcatatg 311
Query: 65 caccaagaggtttttgagctcctcattggttaagtatcaaatatttaccatggtgacagc 124
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 310 cactaagaggtttttgagctcctcattggttaagtatcaaatatttaccatggtgacatc 251
Query: 125 taatgctcaataaatgtcgactctctgatgtcctaaactatgtgatttttcacacatgaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 taatgctcaataaatgtcgactctctgatgtcctaaactatgtgatttttcacacatgaa 191
Query: 185 cctatttagttttataataagttagtggtgtggaagctatcatttatcttcctcttaagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 cctatttagttttataataagttagtggtgtggaagctatcatttatcttcctcttaagg 131
Query: 245 atgggacagccaagacacaaaaatctaccatgtaacttattcagggtgactcagcagcaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atgggacagccaagacacaaaaatctaccatgtaacttattcagggtgactcagcagcaa 71
Query: 305 gagaaagtact 315
|||||||||||
Sbjct: 70 gagaaagtact 60
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_a07.g1 MSMg01no173_a07.g1 CHROMAT_FILE:
MSMg01no173_a07.g1 PHD_FILE: MSMg01no173_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:36 2005
(292 letters)
>mm_chrX_22481865_22482555
Length = 691
Score = 534 bits (276), Expect = e-156
Identities = 288/292 (98%), Gaps = 1/292 (0%)
Strand = Plus / Plus
Query: 1 ctcatttatagttggtttaactatgcccagatacagagagttgaatacaacccaatacag 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 ctcatttatagttggtttaactatgcccagatacagagagttgaatacaataaaatacag 260
Query: 61 taaggtatttgaccaaaggccaaatatctatgtataattattgaaaaaaaaaaacagcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 taaggtatttgaccaaaggccaaatatctatgtataattattgaaaaaaaaaa-cagcac 319
Query: 121 aatggcctttctcatttccaaagcacttcccaagtgaaaagcactatgaaataggtcaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aatggcctttctcatttccaaagcacttcccaagtgaaaagcactatgaaataggtcaac 379
Query: 181 actggaggttttagttgggcacgttgctgtatgcctttaatcccaccaactcagaaagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 actggaggttttagttgggcacgttgctgtatgcctttaatcccaccaactcagaaagtg 439
Query: 241 gatctctggaagttctatgacagcctgacctccaaagtgagttcttagaaac 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gatctctggaagttctatgacagcctgacctccaaagtgagttcttagaaac 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 691
Length adjustment: 9
Effective length of query: 283
Effective length of database: 682
Effective search space: 193006
Effective search space used: 193006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
