Query= MSMg01no173_f16.b1 MSMg01no173_f16.b1 CHROMAT_FILE:
MSMg01no173_f16.b1 PHD_FILE: MSMg01no173_f16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:01 2005
(318 letters)
>mm_chrX_86852180_86852897
Length = 718
Score = 578 bits (299), Expect = e-169
Identities = 307/311 (98%), Gaps = 4/311 (1%)
Strand = Plus / Minus
Query: 5 gaattccaggacagccaaggctacacagagaaaccctggtctcgagaaacaacaaacaaa 64
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 643 gaattccaggacagccaaggctacacagagaaaccct-gtctcgagaaacaacaaacaaa 585
Query: 65 caaacaaacaaccccccaaaacaaaacaaaacaaaaatcaacaacaaaaacaaaacaaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 caaacaaacaaccccccaaaacaaaacaaaacaaaaatcaacaacaaaaacaaaacaaaa 525
Query: 125 caaaaaaaaacattcttacccaattttcatcatatatattttgcagattttaaggtaagt 184
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 c---aaaaaacattcttacccaattttcatcatatatattttgcagattttaaggtaagt 468
Query: 185 gtccatttagttgacagcaactcttgttattactcactttactgtcccagaaagaaatgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gtccatttagttgacagcaactcttgttattactcactttactgtcccagaaagaaatgt 408
Query: 245 ttgtgttgtcttaattttaattctataggacaagagatagaaatcaacacaagagtaaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ttgtgttgtcttaattttaattctataggacaagagatagaaatcaacacaagagtaaag 348
Query: 305 aaaatggtcta 315
|||||||||||
Sbjct: 347 aaaatggtcta 337
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_f16.g1 MSMg01no173_f16.g1 CHROMAT_FILE:
MSMg01no173_f16.g1 PHD_FILE: MSMg01no173_f16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:01 2005
(284 letters)
>mm_chrX_86676859_86677542
Length = 684
Score = 501 bits (259), Expect = e-146
Identities = 277/285 (97%), Gaps = 5/285 (1%)
Strand = Plus / Plus
Query: 1 aacaaaatgaaatcaactaggcacttaaggtcctggagtagatagccaaaacaatgaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacaaaatgaaatcaactaggcacttaaggtcctggagtagatagccaaaacaatgaata 260
Query: 61 caaatttattttgggtgatttattgtcagctttgtttgggcatttttaaccttgctgata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaatttattttgggtgatttattgtcagctttgtttgggcatttttaaccttgctgata 320
Query: 121 ttgttcttgatgttttctggatttatgtttctatagtgtgtgtgcgtgtctgtgtgtgtg 180
| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 tcgtgcttgatgttttctggatttatgtttctatagtgtgtgtgtgtgtctgtgtgtgtg 380
Query: 181 tgtgtgtgtctgtgagttttctggggtatgtatttctgatccttttgatcatcatttttt 240
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgt----ctgtgagttttctggggtatgtatttctgatccttttgatcatcatttttt 436
Query: 241 t-atttttaattattttctggtttgtttgtgaggttgcttatttt 284
| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttatttttaattattttctggtttgtttgtgaggttgcttatttt 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
